| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2179 |
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| Symbol | |
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| ID | 3240759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 2211424 |
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| End bp | 2213046 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637168865 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_189735 |
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| Protein GI | 161486707 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAAGG AAAAAGTTAT GGACTGGACG ACCTTCATAG GCGTAGTCAT TGTGTTACTT
TTTGCTGTTA TACCTATGAT GGTTTTTCCG AAAGCAAGTG AAATAATCAT TACCGATATC
AATAGTGCCA TTTCTAATTC AATTGGATCG GTATATCTCT TTATGGGACT GGCTATATTT
TGTTTTGTTT TATACATAGC ATTTGGTAAG TATGGGAATG TCACGTTAGG AAAAGCGACT
GACAAACCTG AATTTAATAA TTTCACATGG GCAGCCATGT TATTCTGTGC CGGTATTGGT
TCAGATATTT TATATTGGGG TGTTATTGAG TGGGCATTTT ATTATCAAGT ACCTCCTAAC
GGTGCAAAAT CAATGTCCGA TCAAGCACTT CAATATGCAA CTCAATATGG TATGTTTCAC
TGGGGACCTA TAGCCTGGGC AATATATGTG CTACCAGCTT TGCCAATCGG TTATTTAGTT
TTCGTTAAGA AGAAACCCGT CTATAAAATT AGTCAAGCTT GTCGACCAAT TTTAAAAGGA
CATACGGATA AATTATTAGG AAAAATCGTA GATATTTTAT TTATTTTCGG TTTGCTCGGT
GGTGCTGCAA CATCACTCGC TCTAGGCGTG CCGATGATCT CAGCTGGTAT TGAACGATTG
ACTGGTTTAG ATGGATCTAA TATGATTTTA CGTTCAATCA TCTTACTAAC TATTACAGTT
ATTTTCGCAA TCAGTTCTTA CACAGGTTTG AAAAAAGGTA TTCAAAAATT AAGTGATGTT
AACGTTTGGT TATCATTTTT ATTATTAGCA TTTGTATTCA TCGTAGGTCC AACTGTGTTT
ATTATGGAAA CTACAGTTAC AGGGTTCGGT AATATGATAA AAGATTTCTT CCATATGGCG
ACATGGATGG AACCATTTGG TGGCATAAAA GGTCGTAAAG AAACGAATTT CCCTCAAGAT
TGGACAATAT TCTACTGGTC ATGGTGGCTC GTTTATGCAC CGTTTATTGG ATTGTTTATC
GCGCGTATCT CAAAAGGACG TACACTTAAA GAAGTTGTAT TAGGAACAAT ATGCTATGGA
ACATTAGGTT GTGTGTTATT TTTCGGTATT TTTGGTAACT ATGCTGTATA TCTACAAATT
ACTGAGCAAT TTAATGTAAT AAGCTATTTA AACAATTATG GTACAGAGGC AACAATCATA
GAAATAATGC ATCAACTACC ATTCTCGACA ATTACTATTA TCTTATTCTT AATATCAGCT
TTCTTATTCT TAGCAACAAC ATTCGATTCT GGTTCATATA TTTTAGCAGC AGCGTCACAG
AAAAAAGTGA TAGGAGAACC GTTACGTGCT AATCGTTTGT TCTGGGCGTT TGCGTTATGT
TTACTACCGT TCTCTTTAAT GCTAGTTGGA GGAGAACGTG CATTAGAAGT ATTGAAAACA
GCATCATTAC TTGCTAGTGT ACCTTTAATT GTTATATTTA CGCTAATGAT GATTTCGTTC
TTAATTATAC TCGGACGAGA TCGTATCAAG TTAGAAAGAC GTGCAGATAA GCATAAAGAA
ATTGAAAGAC GTTCTCTAAG AATAGTTCAG GTCAAAGACA AACCTGAAGA CGATAACTTA
TAA
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| Protein sequence | MKKEKVMDWT TFIGVVIVLL FAVIPMMVFP KASEIIITDI NSAISNSIGS VYLFMGLAIF
CFVLYIAFGK YGNVTLGKAT DKPEFNNFTW AAMLFCAGIG SDILYWGVIE WAFYYQVPPN
GAKSMSDQAL QYATQYGMFH WGPIAWAIYV LPALPIGYLV FVKKKPVYKI SQACRPILKG
HTDKLLGKIV DILFIFGLLG GAATSLALGV PMISAGIERL TGLDGSNMIL RSIILLTITV
IFAISSYTGL KKGIQKLSDV NVWLSFLLLA FVFIVGPTVF IMETTVTGFG NMIKDFFHMA
TWMEPFGGIK GRKETNFPQD WTIFYWSWWL VYAPFIGLFI ARISKGRTLK EVVLGTICYG
TLGCVLFFGI FGNYAVYLQI TEQFNVISYL NNYGTEATII EIMHQLPFST ITIILFLISA
FLFLATTFDS GSYILAAASQ KKVIGEPLRA NRLFWAFALC LLPFSLMLVG GERALEVLKT
ASLLASVPLI VIFTLMMISF LIILGRDRIK LERRADKHKE IERRSLRIVQ VKDKPEDDNL
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