Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1994 |
Symbol | |
ID | 3240570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 2012875 |
End bp | 2014350 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637168680 |
Product | ABC transporter, substrate-binding protein |
Protein accession | YP_189550 |
Protein GI | 57865477 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TGATTACTCT TATTGTCATG ATATCTTTTG TTTTAGCGAG CTGTGGGGGC ACATCAAGTA CAGACAAAGA CACCCTCAAT GTTGAAATAC CTTTGAAAAC TAAATCAATT GCACCTTACG AAACTGATAT CCCAGTTAAA ACAGGTGCCT TGGAATCGCT TTTTAAAATG TCGAAGAATG GTAAAGTAAA ACCTTTATTA GTCAAAAATT ATCATCAAGT ATCTGACAAT CAACTAGAAC TCACTTTAAA AGATAATATT AAATTTCAAA ACGGTCATCA TTTAACAGGC GAAGCTGTAA AACGCAGTCT CGAAGAAGGA ATGAAAAAAA GTGATTTGTT AAAAGGATCA CTTCCTATTA AATCAATCAA TGCTCATGGA CAAAAAGTCA CAATCACTAC TAAAGAACCT TATCCAGAAT TAATGTCTGA ACTCGCAAGC CCATTTGCTG CTATTTACGA CACAAAAGCT AAAAACAAAG TAACTGATCA ACCTGTTGGT ACGGGTCCTT ATAAAATTGA TCAGTATAAA CGTTCGCAAA AAATCGTACT AAAACAATTC AAAGACTACT GGCAAGGTAC GCCAAAATTA AAAAGAATTA ATGTCACTTA TCATGAAGAT GGTAATACTC GTGTTGATCA CTTATTATCA GGCAAATCAG ATTTGACTAC TGATGTTCCA ATTGAACGCG TTGATGATGT AAAAAAATCT AACAAAGCAA ACATTCAAAG TACATCAGGC TTTAGAACGC ATTTAATGTT ATACAATCAT GATAGTAAAA AAGTTAATAA AAAAGTAAGA GAAGCACTAG ATATGATTAT TAATCGAAAA GACATTGCTA AAAATGTTTC TAAAAATTAT GCTGAGCCAG CATCAGGTCC TTTTAACCAT CGATTAAAAT CATTAGAAAA AGAGGAAATT CAATCACAAG ACATCAAGCG TGCAAAAGAA CTTTTAGCTC AAGAAGGTTA TTCCAAATCG CATCCTCTTA AATTAAACAT GGTCACATAC GATGGCAGAC CAGAATTGCC TAAAATTGGA CAGGTGATAC AATCTGAAGC TAAAAAGGCA AATGTTGATA TACAATTACG CAATGTAGAT GATATCGAAG GATATCTCAA AAACAAACAG AGTTGGGATG TTTCAATGTA TAGTTATTTA AGTGTGCCAC GTGGTGATAC AGGTTATTTC TTTAACACTG CATACTTACC TGATGGAGCA TTAAATAAAG GTAATTATAG TAATACTAAA GTCACTCAGT TAATTAAAGA ATTAAATACT ACTTTCGGTG ACAAGCAACG TGGTCAAGTG ACTAATGAAA TACTAAATGA ATCTAAAAAA GATATTCCTA ACAGCTATAT CACATACAAC TCTCAAATAG ATGGTGTGAA TAATAAAGTA AGACATTTTA ATGTTACACC AGAATCTATC TATTTAATTG ATTATAAATT AAGTAAAAAA GAATAA
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Protein sequence | MKKLITLIVM ISFVLASCGG TSSTDKDTLN VEIPLKTKSI APYETDIPVK TGALESLFKM SKNGKVKPLL VKNYHQVSDN QLELTLKDNI KFQNGHHLTG EAVKRSLEEG MKKSDLLKGS LPIKSINAHG QKVTITTKEP YPELMSELAS PFAAIYDTKA KNKVTDQPVG TGPYKIDQYK RSQKIVLKQF KDYWQGTPKL KRINVTYHED GNTRVDHLLS GKSDLTTDVP IERVDDVKKS NKANIQSTSG FRTHLMLYNH DSKKVNKKVR EALDMIINRK DIAKNVSKNY AEPASGPFNH RLKSLEKEEI QSQDIKRAKE LLAQEGYSKS HPLKLNMVTY DGRPELPKIG QVIQSEAKKA NVDIQLRNVD DIEGYLKNKQ SWDVSMYSYL SVPRGDTGYF FNTAYLPDGA LNKGNYSNTK VTQLIKELNT TFGDKQRGQV TNEILNESKK DIPNSYITYN SQIDGVNNKV RHFNVTPESI YLIDYKLSKK E
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