Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1968 |
Symbol | |
ID | 3240677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1987115 |
End bp | 1988560 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637168654 |
Product | PTS system, sucrose-specific IIBC components |
Protein accession | YP_189524 |
Protein GI | 57865419 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component [TIGR01996] PTS system, sucrose-specific IIBC component |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000108474 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTATA AAAAATCTGC TGAAGAAATA CTTAAAGCAA TTGGCGGTGA AGAAAATTTA GATGCAATGG CACATTGTGC AACTCGATTA CGTTTAGTAT TGAACGATGA GAGTAAAGTA GACGAAGATA CCTTGTCTAA TATGGACGTC GTCAAAGGAA CATTCTCTAC AGGTGGTCAA TACCAAATTA TTATAGGTTC AGGGACAGTA AATAAAGTAT TTAATGAATT AGAAAAAATA ACTGGAAAAG AAGCATCTAC GACTTCAGAA GTTAAAGATA AATCATCTAA GCATATGAAT CCATTCCAAA AATTTGTGAA AATGTTATCT GATATCTTTG TTCCTATTAT TCCGGCTATT GTAGCTGGTG GTTTGTTAAT GGGATTAAAT AATATTTTCA CAGCTAAAGA TTTGTTTTAT GATGGTAAAT CTATCATAGA TGTACATAGT CAATTTTCTG GCTTGGCTGA TATGATTAAT ATATTTGCAA ATGCACCTTT TACATTATTA CCAATACTTA TTGGTTTTAG TGCAGCTAAG CGATTTGGTG GTAATCCTTA TTTAGGTGCA GCTCTAGGTA TGATACTTGT TCATCCTGGA TTGATGAGTG CATATGATTT TCCAAAAGCT TTAGAAGAAG GAAAAGCTAT TCCACACTGG GATGTCTTTG GGCTACATAT TAATGAAGTA GGTTATCAGG GACAAGTATT ACCTATGCTC GTAGCAACAT ATATTTTAGC TACGATTGAA AAATGGTTAC GTAAAGTTAT TCCAACTGTG TTAGATAATT TATTGACGCC ATTATTATCA ATTTTTATTA CAGCATTTAT AACATTTTTA TTTGTAGGGC CTGTCACTCG TCAATTAGGT TATTGGTTAT CTGATGGATT GACTTGGTTA TATGAATTTG GTGGAGCTAT TGGTGGACTT ATATTTGGTT TATTATATGC GCCAATCGTC ATTACAGGAA TGCACCATAG CTTTATTGCA GTTGAAACGA CATTAATTGC TGATGCGACT AAAACAGGTG GTTCATTTAT CTTCCCAATC GCAACGATGT CAAATATTGC ACAAGGTGGT GCAGCTTTAG CTGCATTCTT TATCATTAAG CAAAATAAAA AATTAAAAGG TGTTGCTTCC GCGGCGGGTA TTTCAGCTTT ACTAGGAATT ACAGAACCAG CAATGTTTGG TGTCAATCTT AAATTGAGAT ATCCATTTAT AGGTGCTGTT GCAGGATCAG GTATAGGTGC GGCTTATATT TCATTCTTCA AAGTAAAAGC GATAGCGCTT GGTACAGCTG GATTACCTGG ATTTATATCT ATAAATCCTA CACACGCTGG TTGGTTACAT TACTTAATAG GAATGCTAAT TGCATTTGTT GTTTCAGTTG TCGTCACTTT AGTACTTTCT CGAAGAAAAA CAAATAAGAC AGCTGTTGAA TCATAG
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Protein sequence | MSYKKSAEEI LKAIGGEENL DAMAHCATRL RLVLNDESKV DEDTLSNMDV VKGTFSTGGQ YQIIIGSGTV NKVFNELEKI TGKEASTTSE VKDKSSKHMN PFQKFVKMLS DIFVPIIPAI VAGGLLMGLN NIFTAKDLFY DGKSIIDVHS QFSGLADMIN IFANAPFTLL PILIGFSAAK RFGGNPYLGA ALGMILVHPG LMSAYDFPKA LEEGKAIPHW DVFGLHINEV GYQGQVLPML VATYILATIE KWLRKVIPTV LDNLLTPLLS IFITAFITFL FVGPVTRQLG YWLSDGLTWL YEFGGAIGGL IFGLLYAPIV ITGMHHSFIA VETTLIADAT KTGGSFIFPI ATMSNIAQGG AALAAFFIIK QNKKLKGVAS AAGISALLGI TEPAMFGVNL KLRYPFIGAV AGSGIGAAYI SFFKVKAIAL GTAGLPGFIS INPTHAGWLH YLIGMLIAFV VSVVVTLVLS RRKTNKTAVE S
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