Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1745 |
Symbol | deoC |
ID | 3242742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1784623 |
End bp | 1785285 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637168430 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_189309 |
Protein GI | 57867629 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAG CAAAATTGAT AGACCATACA TTATTAAAAA CCGATTCAAC AAAGGAACAA ATAGATACAA TTATAAATGA AGCAAAAGCA TATCAGTTTA AGTCTGTATG TGTGAACCCT ACACATGTAC AATATGCATC TGAACAACTT AAAGGAACAG ACGTTTTAGT GTGTACTGTT ATTGGATTTC CACTAGGTGC AACAACTACA GCGGTTAAAT CTTATGAAAC AAAAGATGCG ATTAACAATG GTGCCCAAGA GATTGATATG GTGATAAATA TTGGAGCACT TAAGGATGGT CGTTTTGATA AAGTGCAAAA TGATATCGAA GCCGTCGTTC AAGCAGCCAA TGGTAAAACA GTTAAGGTAA TTATTGAGAC TGTTTTATTA ACTGAGAAAG AGAAGATTAA AGCATGTCAA TTATCTGAAG CGGCAGGTGC ACATTTTGTT AAAACATCCA CAGGTTTTGC TGGTGGGGGT GCAACAGTTG AAGATGTAAA ATTAATGAAA GATACTGTTG GTGATCGTTT AGAAGTAAAA GCGTCAGGTG GCGTGAGAAA TCTAGAGGAT TTTAATAATA TGATTGAAGC GGGTGCTACA CGTATTGGTG CTAGTGCCGG TGTGCAAATT ATTCAAGGAC TTGAATCAAA TACTGATTAC TAA
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Protein sequence | MNKAKLIDHT LLKTDSTKEQ IDTIINEAKA YQFKSVCVNP THVQYASEQL KGTDVLVCTV IGFPLGATTT AVKSYETKDA INNGAQEIDM VINIGALKDG RFDKVQNDIE AVVQAANGKT VKVIIETVLL TEKEKIKACQ LSEAAGAHFV KTSTGFAGGG ATVEDVKLMK DTVGDRLEVK ASGGVRNLED FNNMIEAGAT RIGASAGVQI IQGLESNTDY
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