Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1700 |
Symbol | thiD-2 |
ID | 3242122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1742502 |
End bp | 1743323 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637168386 |
Product | phosphomethylpyrimidine kinase |
Protein accession | YP_189265 |
Protein GI | 57867632 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.847021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAC CTAAAATTGC ACTAACAATA GCAGGCACAG ATCCCACCGG TGGGGCAGGT GTTATGGCGG ATTTAAAATC ATTTCACGCG TGTGGCGTTT ATGGTATGGC CACTATAACA AGTATCGTTG CTCAAAATAC CCTAGGAGTT CAACATATCC ATAATTTAGA ATCTTCATGG GTAAAGGAAC AACTTGATAG TGTGTTTGAT GATGAATTAC CACAAGCTAT CAAAACGGGT ATGATTGCAA CAAAAAAAAC GATGGAGTTG ATTCAAAGTT ACTTAAAGGA ACATTCCAAT ATTCCTTATG TGATTGATCC AGTTATGCTT GCCAAAAGTG GTGATTCATT GATGGATGAA AATACTAAAA ATCATTTGCA ATCAACATTA TTACCTTTGG CTGATGTTGT CACTCCGAAT ATACCTGAAG CTGAGGAAAT TACTGGTATT AAAATTAATG ATGAAGAAAG CATACGTAAA GCAGGTCAAA TCTTTATTAA TGAAATTGGT AGTAAGGGTG TTGTAATTAA GGGAGGGCAT TCAGCCGATT TAAATAATGC TAAAGATTTT CTTTTTACTA AGAATGAAAC GTATACCTTT GAGAACAAAC GCTTTGATAC TAAACATACT CATGGAACTG GTTGTACTTT TTCAGCAGTT ATTACAGCAG AATTAGCTAA AGGTCGTTCC ATAAAAGATG CAGTTAAAAA AGCAAAAGAG TTTATTTCAT TAAGTATTGA ACATACCCCA GAAATTGGCA AGGGGAGAGG ACCTGTAAAT CATTTTGCTT ATATGAAGAA AGTAGGTTTA GATGATGAAT AA
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Protein sequence | MNKPKIALTI AGTDPTGGAG VMADLKSFHA CGVYGMATIT SIVAQNTLGV QHIHNLESSW VKEQLDSVFD DELPQAIKTG MIATKKTMEL IQSYLKEHSN IPYVIDPVML AKSGDSLMDE NTKNHLQSTL LPLADVVTPN IPEAEEITGI KINDEESIRK AGQIFINEIG SKGVVIKGGH SADLNNAKDF LFTKNETYTF ENKRFDTKHT HGTGCTFSAV ITAELAKGRS IKDAVKKAKE FISLSIEHTP EIGKGRGPVN HFAYMKKVGL DDE
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