Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1673 |
Symbol | ilvA |
ID | 3240622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 1712334 |
End bp | 1713602 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637168354 |
Product | threonine dehydratase |
Protein accession | YP_189238 |
Protein GI | 57867574 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form [TIGR02079] threonine dehydratase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACAGTAA GAACTAAAGT TTCGACAAAA GATATAGATG AAGCATATTT ACGTCTAAAA AATATAGTAA AAGAAACTCC CTTACAATTC GACCATTACT TATCTCAAAA ATATAATTGT AATGTTTATT TAAAAAGAGA AGATTTACAG TGGGTACGAT CCTTTAAATT AAGAGGAGCT TATAATGCTA TTTCAGTATT ATCCAATGAA GAAAAAAATA AAGGTATTAC TTGCGCAAGT GCTGGAAATC ATGCTCAAGG TGTTGCTTAT ACTGCCAAAA AACTCAATTT AAAAGCTGTT ATTTTCATGC CAGTAACTAC ACCACGACAA AAAATCAATC AAGTCAAATT CTTCGGGGAT AGTAACGTAG AAATAGTATT AATTGGCGAT ACATTTGATC ACTGCTTAGC ACAAGCTTTA AACTATACGA AGCAACATAA AATGAATTTT ATTGACCCAT TTAATAATGT ATATACTATT GCAGGACAAG GCACTTTAGC TAAGGAAATA TTAAATCAAG CTGAAAAAGA GGATAAAACA TTTGATTATG TATTTGCTGC TATAGGTGGT GGCGGTCTTA TTTCAGGAGT GAGCACATAT TTTAAAGCAC ATTCCCCCCA TACTAAAATT ATTGGTGTTG AACCAACCGG TGCCAGTAGT ATGTATCAAT CAGTCGTTAT CAACCATAGT ATAGTTACTT TAGAAAATAT TGATAAGTTT GTTGATGGAG CTTCAGTAGC AAGAGTTGGT GATATTACCT TTGATATTGC GAAAGATAAA GTGGATGATT ATGTTCAAGT TGACGAAGGA GCTGTTTGCT CCACAATTCT GGATATGTAC TCTAAACAAG CGATTGTTGC TGAACCAGCT GGTGCTTTAA GTGTAAGTGC CTTAGAACAA TATAAAAAGC AGATTGAAAA TAAAACTATT GTATGCATAG TAAGTGGAGG CAACAATGAT ATTAATCGAA TGAAAGAAAT TGAGGAGCGT TCCCTTCTAT TTGAAGAAAT GAAACATTAC TTTATTTTAA ATTTCCCACA AAGACCTGGT GCTTTAAGAG AATTTGTCAA TGATGTCCTC GGACCTCAAG ACGATATTAC AAAATTTGAA TATTTAAAGA AAACATCACA AAACACTGGA ACTGTTATTA TAGGTATACA GCTGAAACAT CATGATGATC TCATTCAGTT AAAAGATCGC GTATGTCAAT TTGATCCTTC TAATATTTAT ATCAATGAAA ATAAAATGTT ATATTCATTA CTTATTTAA
|
Protein sequence | MTVRTKVSTK DIDEAYLRLK NIVKETPLQF DHYLSQKYNC NVYLKREDLQ WVRSFKLRGA YNAISVLSNE EKNKGITCAS AGNHAQGVAY TAKKLNLKAV IFMPVTTPRQ KINQVKFFGD SNVEIVLIGD TFDHCLAQAL NYTKQHKMNF IDPFNNVYTI AGQGTLAKEI LNQAEKEDKT FDYVFAAIGG GGLISGVSTY FKAHSPHTKI IGVEPTGASS MYQSVVINHS IVTLENIDKF VDGASVARVG DITFDIAKDK VDDYVQVDEG AVCSTILDMY SKQAIVAEPA GALSVSALEQ YKKQIENKTI VCIVSGGNND INRMKEIEER SLLFEEMKHY FILNFPQRPG ALREFVNDVL GPQDDITKFE YLKKTSQNTG TVIIGIQLKH HDDLIQLKDR VCQFDPSNIY INENKMLYSL LI
|
| |