Gene SERP1669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1669 
SymbolleuA 
ID3240618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1707788 
End bp1709323 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content35% 
IMG OID637168350 
Product2-isopropylmalate synthase 
Protein accessionYP_189234 
Protein GI57867570 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID[TIGR00973] 2-isopropylmalate synthase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAC ATATTCAAAT TTTTGATACA ACACTTAGAG ATGGTGAACA AACGCCAGGA 
GTCAATTTTA CTTTTGATGA AAGATTAAAA ATTGCCAAGC AACTAGAAAA ATGGGGAGTA
GATGTACTAG AAGCAGGTTT TCCTGCTTCT AGTACTGGTA GCTTTAAATC AGTAGAAGCT
ATAGCTAAAA CTTTGACTAC AACAGCAGTG TGTGGTTTAG CTAGATGTAA AAAATCTGAT
ATTGATGCTG TATATGAAGC CACTAAAGAA GCTGTAAAAC CTCAAGTACA TGTATTCATT
GCAACCTCCC CTATTCATTT AGAACATAAA TTAAAAATGA CTCAAGATGA AGTTTTAACA
TCAATAAAAG AACACGTTTC TTATGCAAAA CAATTTTTTG AAGTCGTACA ATTCTCTCCA
GAGGATGCAA CAAGAACTGA AATTCCATTT TTAATTGAAT GTGTTCAAAC TGCGATTAAC
GCAGGAGCCA CAATTATCAA CATCCCTGAT ACAGTTGGAT TTAGTTATCC TACAGAGTAT
GGCGAAATTT TTAAACAATT AACACAGGCC GTTAAGTCAA ATTCTAAAAT TATCTTTAGT
GCACATTGTC ATGATGATCT CGGAATGGCA GTTGCTAATA GTTTAGCAGC TATTGAAGGT
GGAGCTAGAC GTATTGAAGG TACCGTGAAC GGTATTGGTG AAAGAGCAGG AAATGCCTCA
CTTGAAGAAG TCGCTTTGGC TTTATATGTA AGGAAGGACC ACTATGGTCT TGAATCTCAA
ATTAACCTTG AAGAAACTAA GAAAACATCT GACTTAATTT CAAGATATGC TGGTATCCGT
GTACCTAGAA ATAAAGCTAT AGTCGGTCAA AATGCATTTA GTCATGAATC CGGAATTCAC
CAAGACGGTG TCCTTAAACA TCGTGAAACC TATGAAATCA TGACACCTCA ACTTGTAGGT
GTGAATACAA CAGAATTGCC ACTAGGTAAA TTGTCTGGTA AACATGCATT TGCCGAAAAG
CTTAAAGCTC TGGGATATGA AATTAAATTG GAAGATCAAG TTACATTATT TAAACAATTT
AAAGAAATTG CCGATAAGAA AAAAAATGTA TCCGATAGAG ATATTCATGC GATTATACAT
GGCTCCGAAC ATGAACACAA TGCTATTTTT CAACTTGATA ACTTACAACT TCAATACGTA
TCTAAAGGTC TACAAAGTGC AGTAGTAGTT ATAAAGGAAA GAAACGGACA AGTTAAACAA
GATTCAAGTA TTGGAACGGG TTCAATTGTT GCAATTTATA ATGCTGTTGA CCGAATTTTC
AAGAAAGACG CAGAATTAAT TGATTATCGT ATTGATTCTG TAACAGAAGG TACTGATGCT
CAAGCAGAAG TACATGTACG AATCATTATT AATCATATTG AAGTGACAGG CATAGGTATA
GACCACGATA TATTAAAAGC TTCATGTAAA GCATATATCG ATGCTCATGC TAAATATATT
TCAGAATATG AGTTGAAAGA AGGTATACGT ACATGA
 
Protein sequence
MEEHIQIFDT TLRDGEQTPG VNFTFDERLK IAKQLEKWGV DVLEAGFPAS STGSFKSVEA 
IAKTLTTTAV CGLARCKKSD IDAVYEATKE AVKPQVHVFI ATSPIHLEHK LKMTQDEVLT
SIKEHVSYAK QFFEVVQFSP EDATRTEIPF LIECVQTAIN AGATIINIPD TVGFSYPTEY
GEIFKQLTQA VKSNSKIIFS AHCHDDLGMA VANSLAAIEG GARRIEGTVN GIGERAGNAS
LEEVALALYV RKDHYGLESQ INLEETKKTS DLISRYAGIR VPRNKAIVGQ NAFSHESGIH
QDGVLKHRET YEIMTPQLVG VNTTELPLGK LSGKHAFAEK LKALGYEIKL EDQVTLFKQF
KEIADKKKNV SDRDIHAIIH GSEHEHNAIF QLDNLQLQYV SKGLQSAVVV IKERNGQVKQ
DSSIGTGSIV AIYNAVDRIF KKDAELIDYR IDSVTEGTDA QAEVHVRIII NHIEVTGIGI
DHDILKASCK AYIDAHAKYI SEYELKEGIR T