Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1666 |
Symbol | ilvB |
ID | 3240606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 1704708 |
End bp | 1706411 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637168347 |
Product | acetolactate synthase, large subunit, biosynthetic type |
Protein accession | YP_189231 |
Protein GI | 57867558 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCATCAAA CAAAGGAATC ACAACCCTTA ATAACACGCA GTGGTTCTCA ATTATTAGTT GAAGCACTTC AGCAGGAAGA TGTAGATTTT ATCTTCGGTT ATCCCGGTGG AGCTGTCTTA CCTTTATACG ATACATTTTA TGACGGGAAA ATCAAACATA TTCTTGCTCG TCATGAACAA GGTGCTACAC ATGCTGCTGA AGGATATGCG CGTGTCTCTG GTAAAACAGG AGTCGTTGTT GTGACAAGTG GACCCGGTGC AACAAATGCC ATTACAGGTA TTACTGATGC ATATAGCGAC TCTTTACCAC TAGTCGTTTT TACTGGTCAA GTTGCTACAC CTGGTATTGG TAAAGATGCT TTCCAAGAAG CTGATTTACT CTCGATGACT ACACCTATTA CAAAACACAA TTATCAAGTT AAAAAGATTG AAGACATTCC AAGAATTGTT CATGAAGCCT TTCATTTAGC GAACACTGGA AGAAAAGGTC CTGTAGTGAT TGATTTCCCT AAAGATATGG GTGTGCTTAA AACTGATGTT GAACTTACAA AAGATATTAA TATTCCTGGT TATGAAGTTA ATAGTAACCC AAATAAAGAG GATATTAATA AGTTAATATA TATGATTAAA GAAGCTAAGA AACCTCTTAT TCTTGCAGGT GCTGGTATTA ATCACTCTAA ATCTAATCAT TTATTAACAG AATTTGTGAC AAGACATCAA ATCCCTACAG TTACAACTCT CCTAGGACTT GGAGCAGTAC CTTATCATCA CCCTTTATTC TTAGGTATGG GAGGTATGCA TGGATCTTAT GCAAGTAATA TGGCTTTAAC AAATTGTGAT TTACTTATCA ATTTAGGTAG TAGATTCGAT GATCGTCTTG CAAGTAAGCC TGATGCATTC GCACCAAATG CAAAGGTTGT ACATGTAGAT ATCGACCCTT CTGAAATAAA TAAAGTTATT AATACAGATT TAGGTATAGT CGCTGATTGC AAGCTTGTGC TTGAGAACTT ATGCCATGAG CAAGTTTTAA CATCCTCCCA CGAAGAATGG AACGATTATT GTATTAATAA CAAAAGTAAC TATCCATTTA AATATGATGA AAATGATAAA AACTTTTGCA AACCACAAAA AGCGATTGAA TATATTGGCA AAGTTACCAA TGGAAATGCA ATTGTTACAA CTGACGTAGG CCAACACCAA ATGTGGACAG CACAATTCTA TCCATTTAAA AATTATGGAC AATGGGTAAC AAGTGGTGGT TTAGGTACTA TGGGATTTGG AATTCCATCA GCAATAGGAG CACAATTAGC TGAACCTGAG AAAACAGTTG TATGTTTTGT AGGAGATGGC GGTTTTCAAA TGACGAACCA AGAAATGGCT TTACTTCCAG AATATGGACT TAATGTCAAA ATAGTACTTA TTAATAACGG AACTTTAGGT ATGGTAAAAC AATGGCAAGA TAAATTCTTT AATAAACGAT TTTCTCATTC TGTATTTAAC GATCAACCTG ATTTTATGAA AATGGCGGAA GCATATGGTA TTAAGGGATT CTTGATAGAT TCTCCAGATA AATTAGAATC TTCAATTGAT GAAGCATTTG CATATCATGG ACCGGCACTC ATTGAAGTTA GAATCTCACC TATAGAACCA GTTAATCCAA TGGTACCTAG TGGCAAATCA AATCATGAAA TGGAGGGTTA CTAA
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Protein sequence | MHQTKESQPL ITRSGSQLLV EALQQEDVDF IFGYPGGAVL PLYDTFYDGK IKHILARHEQ GATHAAEGYA RVSGKTGVVV VTSGPGATNA ITGITDAYSD SLPLVVFTGQ VATPGIGKDA FQEADLLSMT TPITKHNYQV KKIEDIPRIV HEAFHLANTG RKGPVVIDFP KDMGVLKTDV ELTKDINIPG YEVNSNPNKE DINKLIYMIK EAKKPLILAG AGINHSKSNH LLTEFVTRHQ IPTVTTLLGL GAVPYHHPLF LGMGGMHGSY ASNMALTNCD LLINLGSRFD DRLASKPDAF APNAKVVHVD IDPSEINKVI NTDLGIVADC KLVLENLCHE QVLTSSHEEW NDYCINNKSN YPFKYDENDK NFCKPQKAIE YIGKVTNGNA IVTTDVGQHQ MWTAQFYPFK NYGQWVTSGG LGTMGFGIPS AIGAQLAEPE KTVVCFVGDG GFQMTNQEMA LLPEYGLNVK IVLINNGTLG MVKQWQDKFF NKRFSHSVFN DQPDFMKMAE AYGIKGFLID SPDKLESSID EAFAYHGPAL IEVRISPIEP VNPMVPSGKS NHEMEGY
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