Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1594 |
Symbol | |
ID | 3241626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1623886 |
End bp | 1624854 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637168275 |
Product | hypothetical protein |
Protein accession | YP_189159 |
Protein GI | 57867505 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00507072 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATTAG ATATTTTTAG TCCAACATTA TCAGTAGTAC CAAAAGGTTT AGAAGGAAAA ACAATTTTAT TATATGGATC AAACTCAGTA GGTAAGACTT TGAACGCTAC AAAATTAAGT AAACCATTCT ACTTAGGTTT TGAAAAAGGT TTGAACGCAA TTTCTGGTAT TCCTTTTAAC TATATTACAA AATGGTCAGA CTTCAAAAAA TTAAACAAAC AATTTACAGG TAAAGATAAA GATAAAGCCC GTGAGTTATA CGATACAATC ATTTTCGATA CAGTAGATAT TGCTTCTATG TACTGTCAGA AATATGTAGC AAATGCACAT GGTGAGAAGG ATATTGCAAG CGGTAATGGT GGTTTCGGCT TATGGTCAAA CTACAAAGAA GAATTTTGGT TAGAAATTGA TAAATTAACT TCTTGTGGAT ATACAGTGGT ATTCATTGGC CATACTTCAG TAGATAAGAA TACTGATCAA ATCATTCCAG CTGGTGATAG TCGTTCAATG GGTATTGTAA GAGACTTAGT TGATATCACA GTTTATATCA AGTCTAATGG TGTTGATGAA GACGGAAATG TTGTTTTATC TACTGGATAT GTTCGTGAAA CAGAAGAATT CTTCGCACGT TCTAGATTTG ATTTAATGCC TAATAAAATT GAACCATTCA CTGCTGAGAA TTTAGAAAAA GCAGTTATTA AAGGTATTGA ACGTGAAGAA CAACAAGGTG GAACAACAGT TTCATATGAT GAGTTCGTGG AGAATACTAA ATCTGAAGAA TTAGATTTTG GAGAATTAAA AGAAAAATTA ACAGAATTAG GAAAAACTTA TCTGAAAGCA GATAGATTAG AAGAATTTAC ACAAGCAATG GAAGATACAT TCGGTGCAGA TGTTAAAGTA GCTGACTTGA AAGAACGTCA AGTTGAAGCA GTATCTATCT TGATTGATGA ATTAAACGAA AATTTATAG
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Protein sequence | MSLDIFSPTL SVVPKGLEGK TILLYGSNSV GKTLNATKLS KPFYLGFEKG LNAISGIPFN YITKWSDFKK LNKQFTGKDK DKARELYDTI IFDTVDIASM YCQKYVANAH GEKDIASGNG GFGLWSNYKE EFWLEIDKLT SCGYTVVFIG HTSVDKNTDQ IIPAGDSRSM GIVRDLVDIT VYIKSNGVDE DGNVVLSTGY VRETEEFFAR SRFDLMPNKI EPFTAENLEK AVIKGIEREE QQGGTTVSYD EFVENTKSEE LDFGELKEKL TELGKTYLKA DRLEEFTQAM EDTFGADVKV ADLKERQVEA VSILIDELNE NL
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