Gene SERP1579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1579 
Symbol 
ID3241602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand+ 
Start bp1609626 
End bp1610300 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content35% 
IMG OID637168260 
ProductIS431mec-like transposase 
Protein accessionYP_189144 
Protein GI57867481 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTATT TCAGATATAA ACAATTTAAC AAGGATGTTA TCACTGTAGC CGTTGGCTAC 
TATCTAAGAT ATGCATTGAG TTATCGTGAT ATATCTGAAA TATTAAGGGG ACGTGGTGTA 
AACGTTCATC ATTCAACGGT CTACCGTTGG GTTCAAGAAT ATGCCCCAAT TTTATATCAA 
ATTTGGAAGA AAAAGCATAA AAAAGCTTAT TACAAATGGC GTATTGATGA GACGTACATC 
AAAATAAAAG GAAAATGGAG CTATTTATAT CGTGCCATTG ATGCAGAGGG ACATACATTA 
GATATTTGGT TGCGTAAGCA ACGAGATAAT CATTCAGCAT ATGCGTTTAT CAAACGTCTC 
ATTAAACAAT TTGGTAAACC TCAAAAGGTA ATTACAGATC AGGCACCTTC AACGAAGGTA 
GCAATGGTTA AAGTAATTAA AGCTTTTAAA CTTAAACCTG ACTGCCATTG TACATCGAAA 
TATCTGAATA ACCTCATTGA GCAAGATCAC CGTCATATTA AAGTAAGAAA GACAAGGTAT 
CAAAGTATCA ATACAGCAAA GAATACTTTA AAAGGTATTG AGTGTATTTA CGCTCTATAT 
AAAAAGAACC GCAGGTCTCT TCAGATCTAC GGATTTTCGC CATGCCACGA AATTAGCATC 
ATGCTAGCAA GTTAA
 
Protein sequence
MNYFRYKQFN KDVITVAVGY YLRYALSYRD ISEILRGRGV NVHHSTVYRW VQEYAPILYQ 
IWKKKHKKAY YKWRIDETYI KIKGKWSYLY RAIDAEGHTL DIWLRKQRDN HSAYAFIKRL 
IKQFGKPQKV ITDQAPSTKV AMVKVIKAFK LKPDCHCTSK YLNNLIEQDH RHIKVRKTRY 
QSINTAKNTL KGIECIYALY KKNRRSLQIY GFSPCHEISI MLAS