Gene SERP1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1300 
SymbolmurC 
ID3242924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1348071 
End bp1349384 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content32% 
IMG OID637167949 
ProductUDP-N-acetylmuramate--L-alanine ligase 
Protein accessionYP_188872 
Protein GI57867174 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01082] UDP-N-acetylmuramate--alanine ligase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.857195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACACT ATCATTTTGT CGGAATTAAA GGCTCAGGCA TGAGTTCATT AGCACAAATC 
ATGCATGACC TCGGTCATGA AGTACAAGGT TCAGACATAG AATCATACGT TTTTACAGAA
GTTGCATTAA GAAATAAAGG GATTAAAATT TTACCTTTTG ATGCAAATAA TATTACAAAA
GAAATGGTTG TCATCCAAGG TAATGCATTT CCTGATAATC ATGAAGAAAT TGTTAGGGCA
CATGAATTAA AGCTTGATAT TATAAAATAT CATGACTTTC TTGGTCATGT TATAAATCAA
TATACATCTG TTGCTGTTAC AGGTGCACAC GGTAAAACGT CTACAACTGG TTTGTTGTCA
CATGTGATGA ATGGAGATAA AAAGACATCA TTCCTAATCG GTGATGGTAC AGGTATGGGA
CTACCAGGAA GTGACTATTT TGCTTTTGAG GCTTGTGAAT ACCGTAGGCA CTTCTTAAGT
TATCATCCAG ATTATGCAAT TATGACTAAT ATTGATTTTG ACCATCCAGA TTATTTTAAA
AATATCGATG ATGTTTATGA TGCATTCCAA CATATGGCAT TAAATGTTAA GAAAGGAATT
ATTGCTTGGG GCGATGATGA ATATTTACGT AAATTAGATG TGGATATTCC GGTTTATTAT
TATGGCTTTA AAGAAACAGA TGACATCTAT GCTAAAAATA TTCAAATTAC TGAAAAGGGT
ACGCAATTTG ATGTATATAT TAAAGGCGAA TTTTATGATC AATTCTTATC CCCACAATAT
GGAAATCACA ACATTCTAAA CGCACTTGCT GTAATAGCAA TTAGTTATTT AGAAGACATG
AATGTAGAAA ATATTAAAGA AGCACTGATA ACATTTGGTG GTGTAAAACG TCGTTTTAAT
GAAACAAAAG TATCAAATCA AGTAATAGTA GACGATTATG CACACCATCC AAGAGAAATT
AGTGCTACAA TTGAGACAGC GCGAAAAAAA TATCCGCAAA AAGATGTTGT TGCCGTTTTT
CAACCACATA CGTTCTCAAG AACTCAAGCA TTTTTAAACG AATTTGCTGA GAGTTTAAGT
AAGGCAGACC AAGTATTTTT ATGTGAAATA TTCGGTTCAA TAAGAGAAAA TACGGGAGAT
TTAACTATAG AAGATTTAAT CAATCGTATT GACGGCTCGA CGCTTATAGA TGAAAATAGT
ATTGATGTAT TAGAAAAATT TGATAACGCT GTAATTTTAT TTATGGGCGC TGGTGACATT
CAAAAGTTAC TAAAAGCTTA TTTCGAAAAA TTAGGCGTAA AAAATGATTT TTAA
 
Protein sequence
MTHYHFVGIK GSGMSSLAQI MHDLGHEVQG SDIESYVFTE VALRNKGIKI LPFDANNITK 
EMVVIQGNAF PDNHEEIVRA HELKLDIIKY HDFLGHVINQ YTSVAVTGAH GKTSTTGLLS
HVMNGDKKTS FLIGDGTGMG LPGSDYFAFE ACEYRRHFLS YHPDYAIMTN IDFDHPDYFK
NIDDVYDAFQ HMALNVKKGI IAWGDDEYLR KLDVDIPVYY YGFKETDDIY AKNIQITEKG
TQFDVYIKGE FYDQFLSPQY GNHNILNALA VIAISYLEDM NVENIKEALI TFGGVKRRFN
ETKVSNQVIV DDYAHHPREI SATIETARKK YPQKDVVAVF QPHTFSRTQA FLNEFAESLS
KADQVFLCEI FGSIRENTGD LTIEDLINRI DGSTLIDENS IDVLEKFDNA VILFMGAGDI
QKLLKAYFEK LGVKNDF