Gene SERP1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1285 
Symbol 
ID3241423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1329229 
End bp1329975 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content28% 
IMG OID637167934 
Productglycerophosphoryl diester phosphodiesterase, putative 
Protein accessionYP_188857 
Protein GI57867242 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000464019 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTC GACGTCCAAA TCAACATTTC CAAATCGTAG CGCATAGAGG ATTACCTGAA 
GATTATCCTG AAAATACTAT TATCGCTTAT CGACATGCGC TCATGTTACA TATAGATATG
TTGGAAATTG ATGTACATTA CACAAAAGAT AAAGAACTTG TCGTTATACA TGATGATACT
ATCGATCGTA CGTCAAATGG TAAAGGTAAG GTTTCTGATT TTACTTTAAA AGAATTAAAA
GCGTTAGATT TTGGTTTCTA TAAAGGAGAG AAATTTAAAG GGGAGAGTAT ACCGACTTTT
GATGAAGTGT TAGATTTAGC AGATAACTTT TCACAAAAAT TATTAATAGA AATAAAAAAG
CCTAGTCAGT ATCCAAATAT TGAAAATATG ATTGTTGATA AATTGAAGGA AAGACAAATA
TCTAAATCTA AAGTGATTTT ACAATCATTC GATTTTGATT GTGTAAAAAA ATTGTCAGCA
ATGAATTTAG ATTATGAATT AGGTTTATTA ATTAGTAAGA AAAAATATTG GCACAAGTTA
CCAAATTTCA AAAAAATTGC CAAAGTTGCT GATTATGCTA ATCCTAATTA TCAAATTGTT
TCGAAGAAAT TTATGCAACT TGCTCATGAG GAAGAGTTAA AAGTATTACC TTATACTGTA
AATAAATTAA AAGAATCACA AAAATTAATA GATATTGGTG TTGACGGTAT TATTTCCGAT
GTACCTGAAG ATTTATTTGA GCTATAA
 
Protein sequence
MKFRRPNQHF QIVAHRGLPE DYPENTIIAY RHALMLHIDM LEIDVHYTKD KELVVIHDDT 
IDRTSNGKGK VSDFTLKELK ALDFGFYKGE KFKGESIPTF DEVLDLADNF SQKLLIEIKK
PSQYPNIENM IVDKLKERQI SKSKVILQSF DFDCVKKLSA MNLDYELGLL ISKKKYWHKL
PNFKKIAKVA DYANPNYQIV SKKFMQLAHE EELKVLPYTV NKLKESQKLI DIGVDGIISD
VPEDLFEL