Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1285 |
Symbol | |
ID | 3241423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1329229 |
End bp | 1329975 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 637167934 |
Product | glycerophosphoryl diester phosphodiesterase, putative |
Protein accession | YP_188857 |
Protein GI | 57867242 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000464019 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTC GACGTCCAAA TCAACATTTC CAAATCGTAG CGCATAGAGG ATTACCTGAA GATTATCCTG AAAATACTAT TATCGCTTAT CGACATGCGC TCATGTTACA TATAGATATG TTGGAAATTG ATGTACATTA CACAAAAGAT AAAGAACTTG TCGTTATACA TGATGATACT ATCGATCGTA CGTCAAATGG TAAAGGTAAG GTTTCTGATT TTACTTTAAA AGAATTAAAA GCGTTAGATT TTGGTTTCTA TAAAGGAGAG AAATTTAAAG GGGAGAGTAT ACCGACTTTT GATGAAGTGT TAGATTTAGC AGATAACTTT TCACAAAAAT TATTAATAGA AATAAAAAAG CCTAGTCAGT ATCCAAATAT TGAAAATATG ATTGTTGATA AATTGAAGGA AAGACAAATA TCTAAATCTA AAGTGATTTT ACAATCATTC GATTTTGATT GTGTAAAAAA ATTGTCAGCA ATGAATTTAG ATTATGAATT AGGTTTATTA ATTAGTAAGA AAAAATATTG GCACAAGTTA CCAAATTTCA AAAAAATTGC CAAAGTTGCT GATTATGCTA ATCCTAATTA TCAAATTGTT TCGAAGAAAT TTATGCAACT TGCTCATGAG GAAGAGTTAA AAGTATTACC TTATACTGTA AATAAATTAA AAGAATCACA AAAATTAATA GATATTGGTG TTGACGGTAT TATTTCCGAT GTACCTGAAG ATTTATTTGA GCTATAA
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Protein sequence | MKFRRPNQHF QIVAHRGLPE DYPENTIIAY RHALMLHIDM LEIDVHYTKD KELVVIHDDT IDRTSNGKGK VSDFTLKELK ALDFGFYKGE KFKGESIPTF DEVLDLADNF SQKLLIEIKK PSQYPNIENM IVDKLKERQI SKSKVILQSF DFDCVKKLSA MNLDYELGLL ISKKKYWHKL PNFKKIAKVA DYANPNYQIV SKKFMQLAHE EELKVLPYTV NKLKESQKLI DIGVDGIISD VPEDLFEL
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