| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1203 |
|---|
| Symbol | tgt |
|---|
| ID | 3241036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 1242020 |
|---|
| End bp | 1243159 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637167855 |
|---|
| Product | queuine tRNA-ribosyltransferase |
|---|
| Protein accession | YP_188778 |
|---|
| Protein GI | 57867142 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.261953 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCAG TGACATATGA GCATATAAAA ACATGTAAAC AATCCGGTGC CAGATTAGGA
ATTGTACATA CACCGCATGG ATCTTTTGAA ACACCAATGT TTATGCCGGT TGGGACAAAA
GCAACAGTTA AAACAATGAG CCCGGAAGAA TTAAGAAACA TAGAAGCAAA GATTATATTA
GGAAACACAT ATCATTTGTG GTTACAACCT GGAAATGATA TTATCAAGCA CGCTGGGGGA
TTACACAAAT TCATGAATTG GGACGGTCCA ATTTTAACAG ATTCTGGTGG TTTCCAAGTA
TTTAGTTTAA GTAATTTGCG TAAAATTTCT GAAGAAGGTG TAGAATTTAG ACATCATACC
AATGGCTCAA AACTATTTTT GAGTCCCGAG AAGTCTATGC AAATACAAAA TGATTTAGGT
TCTGATATTA TGATGGCATT TGATGAATGT CCACCAATGC CAGCTGAATA TGATTACGTC
AAAGATTCAA TCGAACGTAC AACTCGATGG GCAGCCAGAT GTTTAAAAGC ACATCAACGC
CCTGGAGATC AAGCACTGTT CGGTATTATT CAAGGTGGAG AATACAAAGA CTTAAGAGAA
CAAAGTGCTA AAGAGCTAGT CAGTCTTGAT TTTCCAGGGT ATGCAATAGG AGGGCTGTCT
GTAGGTGAGC CAAAACCTGT TATGTATGAC ATGGTTGAAC ATACAGAACA ATTTATGCCG
AAAGATAAAC CTAGATATTT AATGGGAGTA GGTTCTCCTG ATGCTTTGAT TGAATGTAGC
ATTAGGGGCA TGGATATGTT TGATTGTGTA TTACCTACTA GAATTGCTAG AAATGGTACT
TGTATGACAT CAAATGGTCG ATTAGTTGTT AAAAATGCTA AATATGCAGA TGATTTAAGA
CCACTTGATG AACAATGTGA CTGTTATACA TGTCAACATT ACACAAGAGC TTATATTAGA
CATCTAGTTA AAGCGGAAGA GACTTTTGGT ATCCGTCTTA CTACTATTCA TAATTTACAT
TTTCTGCTAA AATTAATGGA AGATATTAGA CAAGCCATTC GAGAAGACCG TCTTTTAGAT
TTTAAAGATG AATTCTTTGA ACAATATGGA TTAAATGTAG AAAACCCTAA AAACTTTTAA
|
|---|
| Protein sequence | MPAVTYEHIK TCKQSGARLG IVHTPHGSFE TPMFMPVGTK ATVKTMSPEE LRNIEAKIIL
GNTYHLWLQP GNDIIKHAGG LHKFMNWDGP ILTDSGGFQV FSLSNLRKIS EEGVEFRHHT
NGSKLFLSPE KSMQIQNDLG SDIMMAFDEC PPMPAEYDYV KDSIERTTRW AARCLKAHQR
PGDQALFGII QGGEYKDLRE QSAKELVSLD FPGYAIGGLS VGEPKPVMYD MVEHTEQFMP
KDKPRYLMGV GSPDALIECS IRGMDMFDCV LPTRIARNGT CMTSNGRLVV KNAKYADDLR
PLDEQCDCYT CQHYTRAYIR HLVKAEETFG IRLTTIHNLH FLLKLMEDIR QAIREDRLLD
FKDEFFEQYG LNVENPKNF
|
|---|
| |