Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1201 |
Symbol | |
ID | 3241034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1239114 |
End bp | 1241405 |
Gene Length | 2292 bp |
Protein Length | 763 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637167853 |
Product | bifunctional preprotein translocase subunit SecD/SecF |
Protein accession | YP_188776 |
Protein GI | 57867140 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF [COG0342] Preprotein translocase subunit SecD |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF [TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.732454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGAAAA CGAGTAGAAT AATTGCATTC ATACTCCTCA TAGCTCTACT ATTCACAGGA ATGGGTATGA CGTATAAGAA TGTAGTTAAA AATGTTAATT TAGGTCTAGA TTTGCAAGGT GGTTTTGAAG TCCTCTTCCA AGTAGATCCT TTAAATAAAG GAGATAAAAT TGATAAAAAA GCACTTCAAG CTACATCTCA AACATTAGAA AATCGTGTAA ATGTTCTAGG TGTATCAGAA CCGAAAATAC AAATCGAAGA TCCAAATCGA ATTCGTGTAC AATTAGCAGG TATCAAGGAT CAAGCACAAG CGCGTAAATT ATTATCGACA CAAGCTAATT TAACAATTAG AGATGCTGAA GATCATGTTT TAATGTCTGG TTCAGACATT AAACAAGGCT CTGCTAAACA AGAATTTAAA CAAGAAACTA ATCAACCAAC AGTTACATTT AAAGTAAAAA GTAAAGATAA ATTTAAGAAA GTAACTGAAA AGATTTCTAA AAAACGTGAC AATGTCATGG TAGTTTGGTT AGATTTCGAA AAAGGCGATA GTTACAAGAA AGAAGCTAAA AAGCAACAAG AAGGTAAAAA GCCTAAATTT ATATCTGCAG CGAGTGTAGA CCAACCTATT AATTCTAGTA GTGTTGAAAT TTCAGGTGGC TTCAATGGGA AAAAAGGTGT TGAAGAAGCG AAACAAATAG CTGAGTTATT AAATGCCGGC TCATTACCAG TTGATTTAAA AGAAATTTAC TCTAACTCTG TTGGTGCACA ATTTGGTCAA GATGCTCTTG ATAAGACCAT GTTTGCATCA ATTGTAGGTA TAGCATTAAT TTATTTATTT ATGCTTGGTT TCTATCGTTT GCCTGGTTTA GTTGCAATCA TTGCCTTAAC CACTTATATT TATTTAACTT TAGTCGCATT CAATTTCATA TCAGGTGTAT TAACTCTACC TGGATTGGCG GCATTAGTTT TAGGTGTAGG TATGGCTGTC GATGCCAATA TCATAATGTA TGAACGTATT AAAGATGAAC TAAGAATTGG ACGCACGCTT AAACAAGCGT ATTCAAAAGC AAATAAAAGT TCATTCTTAA CTATATTTGA TTCCAACTTA ACAACTGTCA TCGCTGCAGC TGTGCTTTTC TTCTTTGGAG AAAGTTCAGT CAAAGGCTTC GCAACCATGT TACTCTTAGG TATTTTAATG ATATTTGTAA CCGCAGTATT CTTATCAAGA GGGTTGTTAT CATTACTGGT ATCTTCAAAC TTCTTTAAAA AACAATACTG GTTATTTGGT GTTAAGAAGA AGGATAGACA TGATATTAAT GAAGGTAAAG ATGTACATGA TTTAAAAACA TCATATGAAA GGTTAAACTT TGTTAAATTA GCTAAGCCAC TTATTTCACT TAGTATTTTA ATTGTAATTA TTGGTTTGAT TATCATTTCA ATATTTAAAT TAAACTTAGG TATTGATTTC TCATCCGGAA CAAGAGCAGA TATTCAATCT AAAAATGCTA TAACACAAGC ACAGGTTGAG AAAACTGTAA AATCAGTTGG ATTGGAACCA GATCAAATAC AGATTAATGG TAGTGGAAAT AAAAATGCCA CAGTTCAGTT TAAAAAAGAT TTATCACGTG AGGAAGACAA TAAATTAAGT GCTAAGGTGA AATCTGAATT TGGAGATAAT CCACAAATTA ATACCGTTTC ACCTCTCATA GGCCAAGAGC TAGCTAAAAA TGCTGTAACT GCATTAATAC TTGCTTCTAT AGGCATTATT ATCTATGTTT CACTAAGATT TGAATGGCGT ATGGGTCTAT CTTCTGTACT TGCATTATTA CATGACGTAT TTATCATCAT TGCAATCTTT AGTTTGTTTA GATTAGAAGT AGATTTAACA TTTATTGCAG CAGTATTAAC TATCGTTGGT TATTCAATCA ATGATACAAT CGTAACTTTC GACCGTGTTC GAGAAAATCT GCATAAAGTT AAAGTAATTA CGCATACTGA TCAAATTGAT GATATAGTCA ACCGCTCTAT TAGACAAACT ATGACACGTT CTATTAATAC AGTGTTGACT GTAGTTGTAG TTGTAGTTGC AATATTAATA TTAGGTGCAC CAACAATATT TAATTTCTCT TTAGCATTAC TAATTGGATT ATTATCTGGT GTATTCTCGT CAATTTTCAT TGCTGTACCA TTATGGGGCA TGCTTAAGAA ACGACAGTTT AAAAAGACAA AAAATAATAA ATTAGTAGTA CACAAAGAGA AGAAATCTAA CGATGAAAAA ATCTTAGTTT AA
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Protein sequence | MKKTSRIIAF ILLIALLFTG MGMTYKNVVK NVNLGLDLQG GFEVLFQVDP LNKGDKIDKK ALQATSQTLE NRVNVLGVSE PKIQIEDPNR IRVQLAGIKD QAQARKLLST QANLTIRDAE DHVLMSGSDI KQGSAKQEFK QETNQPTVTF KVKSKDKFKK VTEKISKKRD NVMVVWLDFE KGDSYKKEAK KQQEGKKPKF ISAASVDQPI NSSSVEISGG FNGKKGVEEA KQIAELLNAG SLPVDLKEIY SNSVGAQFGQ DALDKTMFAS IVGIALIYLF MLGFYRLPGL VAIIALTTYI YLTLVAFNFI SGVLTLPGLA ALVLGVGMAV DANIIMYERI KDELRIGRTL KQAYSKANKS SFLTIFDSNL TTVIAAAVLF FFGESSVKGF ATMLLLGILM IFVTAVFLSR GLLSLLVSSN FFKKQYWLFG VKKKDRHDIN EGKDVHDLKT SYERLNFVKL AKPLISLSIL IVIIGLIIIS IFKLNLGIDF SSGTRADIQS KNAITQAQVE KTVKSVGLEP DQIQINGSGN KNATVQFKKD LSREEDNKLS AKVKSEFGDN PQINTVSPLI GQELAKNAVT ALILASIGII IYVSLRFEWR MGLSSVLALL HDVFIIIAIF SLFRLEVDLT FIAAVLTIVG YSINDTIVTF DRVRENLHKV KVITHTDQID DIVNRSIRQT MTRSINTVLT VVVVVVAILI LGAPTIFNFS LALLIGLLSG VFSSIFIAVP LWGMLKKRQF KKTKNNKLVV HKEKKSNDEK ILV
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