Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1190 |
Symbol | |
ID | 3241819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 1225301 |
End bp | 1226572 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637167843 |
Product | recombination factor protein RarA |
Protein accession | YP_188766 |
Protein GI | 57867117 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0120628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTACAG AACCATTAGC CTCTCGAATG AGACCGAAAA ATATAGATGA AATTATATCT CAACAACACC TGGTTGGTCC GAAAGGTATA ATAAGAAGGA TGGTAGATAC TAAACGTCTT TCTTCTATGA TTTTTTATGG TCCACCTGGA ATTGGTAAAA CAAGTATTGC AAAAGCAATT TCAGGCAGTA CACAATTTAA ATTCAGACAA TTAAATGCCG TAACAAATAC AAAGAAAGAT ATGCAGCTAA TTGTCGAAGA AGCTAAGATG TCAGGACAAG TTATCTTACT ATTAGATGAA ATTCATCGTT TAGACAAAGC TAAACAAGAT TTTTTATTAC CACATCTTGA AAATGGCAAA ATTGTATTAA TAGGTGCAAC AACTTCAAAT CCTTATCATG CGATAAATCC AGCGATACGA TCTAGAGCAC AAATATTTGA GCTTTACCCA TTAGATCAAG ATGATATAAG ATTGGCATTA GATAGAGCTA TAAATGATAA GGAAAGAGGT TTAAGTACTT ATCATCCTAT TGTAGATGAA GATGCTATCG AATATTTTTC AACGCAAAGC CAAGGCGACG TTAGGAGTGC ATTAAACGCT TTGGAATTAG CTGTACTAAG TGCTCATATT GGTGAAGAAA ACGAAAGACA TATTACATTA GATGACGCAA AAGATTGCTT ACAAAAAGGT GCTTTTGTAA GTGATAAAGA TGGAGACATG CATTATGACG TCATGAGCGC TTTTCAAAAA TCAATTAGAG GTAGTGATGT CAATGCAGCA CTCCACTACT TAGCACGTCT AATTGAAGCT GGTGACTTAC CTACAATCGT ACGTCGATTA CTTGTAATTA GTTATGAAGA TGTTGGGTTA GCATCACCTA ATGCTGGTCA GAGGACTTTA GCAGCAATAC AATCAGCTGA ACGTCTAGGT TTTCCAGAAG CACGAATTCC CCTTAGTCAA GCTGTAATAG AATTATGCTT ATCACCTAAA TCAAATTCTG GTATCACAGC AATAGATAAA GCTCTTGGCG ATATAAGAAA TGGACATATA GGTCAAATAC CGGATTATCT GAAAGACGGT CATTATTCAG GTGCTAAAAA GTTAGGACGG GCTATAGGTT ACAAATATCC TCATAACTAT GAAAATGGTC ATGTTGTACA ACAGTACTTA CCAGAAAAAT TAAAAAACAG AGTGTATTAT GAACCAAAAA CCACATCAAA AAGTGAACAA CAATTTAAAA CAATTTACGA TAACTTACGA AATAAAACAT AA
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Protein sequence | MSTEPLASRM RPKNIDEIIS QQHLVGPKGI IRRMVDTKRL SSMIFYGPPG IGKTSIAKAI SGSTQFKFRQ LNAVTNTKKD MQLIVEEAKM SGQVILLLDE IHRLDKAKQD FLLPHLENGK IVLIGATTSN PYHAINPAIR SRAQIFELYP LDQDDIRLAL DRAINDKERG LSTYHPIVDE DAIEYFSTQS QGDVRSALNA LELAVLSAHI GEENERHITL DDAKDCLQKG AFVSDKDGDM HYDVMSAFQK SIRGSDVNAA LHYLARLIEA GDLPTIVRRL LVISYEDVGL ASPNAGQRTL AAIQSAERLG FPEARIPLSQ AVIELCLSPK SNSGITAIDK ALGDIRNGHI GQIPDYLKDG HYSGAKKLGR AIGYKYPHNY ENGHVVQQYL PEKLKNRVYY EPKTTSKSEQ QFKTIYDNLR NKT
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