Gene SERP1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1190 
Symbol 
ID3241819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1225301 
End bp1226572 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content35% 
IMG OID637167843 
Productrecombination factor protein RarA 
Protein accessionYP_188766 
Protein GI57867117 
COG category[L] Replication, recombination and repair 
COG ID[COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0120628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTACAG AACCATTAGC CTCTCGAATG AGACCGAAAA ATATAGATGA AATTATATCT 
CAACAACACC TGGTTGGTCC GAAAGGTATA ATAAGAAGGA TGGTAGATAC TAAACGTCTT
TCTTCTATGA TTTTTTATGG TCCACCTGGA ATTGGTAAAA CAAGTATTGC AAAAGCAATT
TCAGGCAGTA CACAATTTAA ATTCAGACAA TTAAATGCCG TAACAAATAC AAAGAAAGAT
ATGCAGCTAA TTGTCGAAGA AGCTAAGATG TCAGGACAAG TTATCTTACT ATTAGATGAA
ATTCATCGTT TAGACAAAGC TAAACAAGAT TTTTTATTAC CACATCTTGA AAATGGCAAA
ATTGTATTAA TAGGTGCAAC AACTTCAAAT CCTTATCATG CGATAAATCC AGCGATACGA
TCTAGAGCAC AAATATTTGA GCTTTACCCA TTAGATCAAG ATGATATAAG ATTGGCATTA
GATAGAGCTA TAAATGATAA GGAAAGAGGT TTAAGTACTT ATCATCCTAT TGTAGATGAA
GATGCTATCG AATATTTTTC AACGCAAAGC CAAGGCGACG TTAGGAGTGC ATTAAACGCT
TTGGAATTAG CTGTACTAAG TGCTCATATT GGTGAAGAAA ACGAAAGACA TATTACATTA
GATGACGCAA AAGATTGCTT ACAAAAAGGT GCTTTTGTAA GTGATAAAGA TGGAGACATG
CATTATGACG TCATGAGCGC TTTTCAAAAA TCAATTAGAG GTAGTGATGT CAATGCAGCA
CTCCACTACT TAGCACGTCT AATTGAAGCT GGTGACTTAC CTACAATCGT ACGTCGATTA
CTTGTAATTA GTTATGAAGA TGTTGGGTTA GCATCACCTA ATGCTGGTCA GAGGACTTTA
GCAGCAATAC AATCAGCTGA ACGTCTAGGT TTTCCAGAAG CACGAATTCC CCTTAGTCAA
GCTGTAATAG AATTATGCTT ATCACCTAAA TCAAATTCTG GTATCACAGC AATAGATAAA
GCTCTTGGCG ATATAAGAAA TGGACATATA GGTCAAATAC CGGATTATCT GAAAGACGGT
CATTATTCAG GTGCTAAAAA GTTAGGACGG GCTATAGGTT ACAAATATCC TCATAACTAT
GAAAATGGTC ATGTTGTACA ACAGTACTTA CCAGAAAAAT TAAAAAACAG AGTGTATTAT
GAACCAAAAA CCACATCAAA AAGTGAACAA CAATTTAAAA CAATTTACGA TAACTTACGA
AATAAAACAT AA
 
Protein sequence
MSTEPLASRM RPKNIDEIIS QQHLVGPKGI IRRMVDTKRL SSMIFYGPPG IGKTSIAKAI 
SGSTQFKFRQ LNAVTNTKKD MQLIVEEAKM SGQVILLLDE IHRLDKAKQD FLLPHLENGK
IVLIGATTSN PYHAINPAIR SRAQIFELYP LDQDDIRLAL DRAINDKERG LSTYHPIVDE
DAIEYFSTQS QGDVRSALNA LELAVLSAHI GEENERHITL DDAKDCLQKG AFVSDKDGDM
HYDVMSAFQK SIRGSDVNAA LHYLARLIEA GDLPTIVRRL LVISYEDVGL ASPNAGQRTL
AAIQSAERLG FPEARIPLSQ AVIELCLSPK SNSGITAIDK ALGDIRNGHI GQIPDYLKDG
HYSGAKKLGR AIGYKYPHNY ENGHVVQQYL PEKLKNRVYY EPKTTSKSEQ QFKTIYDNLR
NKT