Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1103 |
Symbol | aroK |
ID | 3240960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1147009 |
End bp | 1147506 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 637167756 |
Product | shikimate kinase |
Protein accession | YP_188679 |
Protein GI | 57867056 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.396409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCCTATTA TTTTAGTTGG TTTCATGGGA ACTGGTAAAA CTACTGTTGG AAAATATCTT TCAGATTTAT ATAATTTAAG TTATGTGGAT TTAGATAATT TTATTGAAGT AAATGAATGT AAATCTATAC CTAATATATT TAATGATATC GGAGAAAAAG GATTTAGATC ATTGGAGACT AGATACCTAA AATCTTGTCT CAATACTTTC GATATTATTT CAACTGGAGG AGGTATTATA GAAGATACGA ATTCATTAAA GCTCTTAAAA AATCAAAAGC ATGTAGTTTG GCTAGACTGT GACATTGAAA TCATTTTCAA ACGAGTTAAA AATGATTCAC ATAGACCCAA TGCTAAAAGT AAAAATCTTA ACCAACTTGA TGCCTTGTAT TCTTCAAGAC TTTCAAGATA TAATGAAATC GCATTCATGA AAGTTGATAG TGCACAGAGT GTTTCTGAAA TTTGCACTTT AATTAAAACA AAATTATTAA GCGATTGA
|
Protein sequence | MPIILVGFMG TGKTTVGKYL SDLYNLSYVD LDNFIEVNEC KSIPNIFNDI GEKGFRSLET RYLKSCLNTF DIISTGGGII EDTNSLKLLK NQKHVVWLDC DIEIIFKRVK NDSHRPNAKS KNLNQLDALY SSRLSRYNEI AFMKVDSAQS VSEICTLIKT KLLSD
|
| |