Gene SERP1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1028 
Symbol 
ID3240701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1074331 
End bp1075473 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content34% 
IMG OID637167682 
Productglycosyl transferase, group 1 family protein 
Protein accessionYP_188605 
Protein GI57866966 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCG GTATAACGTG TTACCCGTCC ATGGGTGGTT CTGGCATTAT TGCTACAGAA 
CTCGGTATTA AAATGGCAGA ACGTGGCCAT GAAGTTCACT TTATTACCTC AAACATACCC
TTTAGAATAC GCAAACCTTT ACCTAACATG ACGTTCCACC AAGTTGAAGT CAATCAATAT
GCCGTATTCC AATATCCACC ATACGATATT ACATTAAGTA CAAAAATTTC TGACGTTATA
CAAGAATATG ATTTAGACAT ATTGCATATG CATTATGCTG TACCTCACGC TGTATGTGGT
ATATTAGCGA AACAAATGTC AGGTAAAAAC GTCAAAATTA TGACAACACT ACATGGCACT
GATATAACTG TGTTAGGTTA TGACCATACT TTACAAAACG CGATAAAATT TGGCATAGAA
CAAAGTGATA TTGTAACAAG TGTTAGCCAT TCTCTAGCAC AGCAAACTTA TGAAATTATC
AATACTAAAA AGGAAATCAT CCCTATATAT AATTTTGTAA GGGAAAATGA ATTCCCAACT
CGGCATAATG AAGAATTAAA AGATTGTTAT GGTATTTCAC CTGAAGAAAA GGTATTGATA
CATGTTTCTA ATTTCAGAAA AGTAAAACGT ATTGATACAG TGATTGAGAC ATTTGCAAAA
GTTCATGAGA GTATACCATC CAAGTTGATA CTTTTAGGAG ATGGTCCAGA ATTAATCGAT
ATGCGACATA AAGCACGAGA ACTTGATGTT GAAACACACG TACTCTTTTT AGGCAAACAA
AATGACGTAA GCGCATTCTA CCAACTATCT GATTTAGTAC TACTCTTAAG TGAGAAAGAA
AGTTTTGGAT TAACTCTCTT AGAAGCAATG AAAACAGGCG TCTTACCTAT AGGGAGTCAT
GCAGGTGGTA TTAAAGAGGT CATCAGACAT GAAGAAACTG GATTTATAGT AGATATAGGG
GATAGTACAC AAGCTGCAAA ATATGCTATT AAACTTTTAT CAAATCCAGA GTTATATCAA
AAAATGCAAT CACAAATGCT GAAAGATATT GAAGCAAGAT TTAGTTCAGA TTTAATTACT
GACCAATATG AAAACTATTA TCGAAAGATG CTAGAACAAG GTGAGAACAA CAATGAGTCA
TGA
 
Protein sequence
MKIGITCYPS MGGSGIIATE LGIKMAERGH EVHFITSNIP FRIRKPLPNM TFHQVEVNQY 
AVFQYPPYDI TLSTKISDVI QEYDLDILHM HYAVPHAVCG ILAKQMSGKN VKIMTTLHGT
DITVLGYDHT LQNAIKFGIE QSDIVTSVSH SLAQQTYEII NTKKEIIPIY NFVRENEFPT
RHNEELKDCY GISPEEKVLI HVSNFRKVKR IDTVIETFAK VHESIPSKLI LLGDGPELID
MRHKARELDV ETHVLFLGKQ NDVSAFYQLS DLVLLLSEKE SFGLTLLEAM KTGVLPIGSH
AGGIKEVIRH EETGFIVDIG DSTQAAKYAI KLLSNPELYQ KMQSQMLKDI EARFSSDLIT
DQYENYYRKM LEQGENNNES