Gene SERP1022 details

Gene Information

• Locus tag: SERP1022
• Symbol: nth
• ID: 3240687
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: -
• Start bp: 1066607
• End bp: 1067266
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637167676
• Product: endonuclease III
• Protein accession: YP_188599
• Protein GI: 57866952
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0177] Predicted EndoIII-related endonuclease
• TIGRFAM ID: [TIGR01083] endonuclease III

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAAGTA AGAAAAAAGC ATTACAAATG ATTGACGTTA TAGCAGATAT GTTTCCTAAT 
GCAGAATGCG AATTAAACCA TAGAAATGCA TTCGATCTTA CAATAGCTGT ATTATTATCA 
GCACAGTGTA CTGATAATCT AGTCAATCGT GTCACTCAAT CATTATTTAG AAAATATCGA 
ACACCTGAAG ATTATTTAAA TGTGAGTGAT GAAGAATTAC AAAATGATAT ACGCTCTATT 
GGATTATATC GCAATAAAGC CAAAAATATA AAAAAATTAT GCCACTCTTT AATTGAACAA 
TTTAATGGTC AAATCCCACA AACACATAAA GAATTAGAGA GTCTAGCTGG AGTGGGGCGT 
AAAACAGCAA ATGTTGTAAT GAGTGTCGCA TTTGGAGAAC CTTCTTTAGC TGTCGATACT 
CATGTTGAGA GAGTTTCTAA ACGTTTGGGA ATTAATCGTT GGAAAGATAG TGTAAGACAA 
GTAGAAGATC GATTATGTGA TATTATCCCA AGAGATAGAT GGAATAAAAG CCATCATCAA 
TTAATATTTT TTGGGAGATA TCATTGTCTT GCTAGAAAAC CTAAATGTGA GATATGTCCG 
CTGTTAAATG ATTGTAGAGA AGGACAAAAA CGACATAAAG CAAAGATAAA GGAGGCGTGA 

 

Protein sequence

MISKKKALQM IDVIADMFPN AECELNHRNA FDLTIAVLLS AQCTDNLVNR VTQSLFRKYR 
TPEDYLNVSD EELQNDIRSI GLYRNKAKNI KKLCHSLIEQ FNGQIPQTHK ELESLAGVGR 
KTANVVMSVA FGEPSLAVDT HVERVSKRLG INRWKDSVRQ VEDRLCDIIP RDRWNKSHHQ 
LIFFGRYHCL ARKPKCEICP LLNDCREGQK RHKAKIKEA