Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1020 |
Symbol | pbp2 |
ID | 3240685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 1063849 |
End bp | 1066080 |
Gene Length | 2232 bp |
Protein Length | 743 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637167674 |
Product | penicillin-binding protein 2 |
Protein accession | YP_188597 |
Protein GI | 57866950 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGAAA ATAAAGGGTC TTCCCAACCT AAAAAGAACA ACAATGGGAA GTCCAATGGA AAAAAGAATA GGAATGTAAA GAGAACGATT ATTAAGATTA TAGGTTTTAT GATTATTGCC TTTTTCGTTC TATTGCTACT CGGTATCTTG TTGTTTGCTT ATTATGCGTG GAAAGCTCCA GCATTTAGCG AATCAAAATT AGATGATCCA ATTCCAGCAA AGATTTACGA TAAAAACGGA GAACTTGTAA AAACACTTGA TAACGGACAG CGACATGAAC ATGTGAATAT CAAAGATGTT CCTAAAGACA TGAAAAACGC TGTTTTAGCT ACTGAAGATA ACCGTTTCTA CCAACATGGA GCATTAGATT ACAAACGTTT ATTTGGTGCC ATTGGTAAAA ACTTAACAGG TGGATTTGGT TCGCAAGGTG CGTCTACACT TACACAACAA GTTGTAAAAG ACTCATTCTT GACACAACAA AAATCTATCG GTCGTAAAGC ACAAGAAGCT TATCTTTCTT ATAGATTAGA ACAAGAGTAC AGCAAAGATG AAATATTCCA AGTTTACATG AATAAGATTT ATTATTCGGA TGGCGTTACT GGAATTAAGG CCGCCGCTAA ATATTACTTC AACAAAGATA TGAAGGATTT AAATTTAGCT GAAGAAGCTT ATCTAGCTGG TTTACCTCAA GTTCCTAACC TTTACAACAT TTACAACAAT CCTAAGGAAG CTAATAATCG TAAAGATACT GTGCTTTATC TTATGCATAA ACATAACCGT ATTAATGATA AACAATATGC GGATGCGAAG AAGATTGATC TTAAAGCTAA CTTAGTTGAA CGTACTAAAA AAGAACGTCA AGTCACTGGA AATGAAAAAA ATCCTGAGTA TGATTCTTAC GTTAATTTCG TTCAATCTGA ATTAATGAAT AACAAGTACT TTAAGGATAA AAATTTAGGT TCAGTTCTTC AAAGTGGTAT AAAAATTTAT ACTAATATGG ATAAAGATGT TCAACAAACG TTACAAGATC GAATTAACAA TGGTTCTTTC TACAAGAATG AAGACCAACA AGTTGGTGCA ACAATTCTAG ATAGTAAAAC TGGTGGATTA GTTGCGATCT CAGGTGGACG TAATTATAAA AATGTTGTTG AAAGAAACCA AGCTACTGAC CCTCACCCTA CTGGTTCATC ATTAAAACCT TTCTTAGCTT ATGGACCTGC AATAGAAAAT ATGAAGTGGT CAACAAATCA TGCGATTCAA GACGAATCAT CATATTGGGT AGATGGTTCT CAATTCAAGA ACTATGATAC GAAAGGCCAT GGAACAGTTT CTATCTATGA TGCATTGCGT CAAAGTTTCA ATATTCCAGC TTTAAAAACT TGGCAACAAG TTAAAAGTCA AGCTGGTAAT GATGCACCTC AGAAATTTGC ATCTAAATTA GGATTGGATT ATAGTGGCAA AATTGGACCT TCTGAAGTAT TAGGTGGATC TTCATCAGAA TTCTCACCTA CTCAACTAGC TTCCGCTTTT GCAGCAATAG CAAATGGTGG TACTTATAAT AACGCGCATT CAATACAAAA AGTTGTTACT CATGAAGGAG ATACAATTGA GTATGAACAT ACGAGTCACA AAGCTATGAA AGACTATACA TCATATATGT TAGCTGAAAT TCTTAAAGGT ACATTTAAAG CATATGGTTC GGCTTATGGA CATGGTGTGT CAGGCGTAAA CATGGGTGCG AAAACTGGTA CTGGTACGTA TGGACAAGAA ATATACGAAA AGTATAATTT ACCTGATAAT GCTGCCAAAG ATGTTTGGAT TAATGGTTTC AGTCCAGAAT ATACTATGTC GGTATGGATG GGCTTCAATA AGGTTAAACA ATATGGAACA AATTCATTTA TCGGTCATTC AGAACAAGAT TATCCACAAT ACTTGTATGA AGATGTGATG TCTAGTATCT CATCTAAAGA TGGTGAAGAT TTCAAAAAGC CTAATGATGT ACAAGGAAGT TCACCGGACA GTCTATCTGT ATCAGGTCAT TCTGATAATA ATACTACTAA CCGTAGTGTT CATGGAAGTA GCGATACATC TTCTTCATCA AATGGTGGCT CTAACTCAGC ATCAAGTGGA AACAACTCGA ATAGTTCGAA TGGTACCAGT CAAGGTAACT CAGGCAATGC ATTTACACGT CTGTTCAATT TAAACTCTAT ATTCGATTAT AAAGTTTCAT AA
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Protein sequence | MTENKGSSQP KKNNNGKSNG KKNRNVKRTI IKIIGFMIIA FFVLLLLGIL LFAYYAWKAP AFSESKLDDP IPAKIYDKNG ELVKTLDNGQ RHEHVNIKDV PKDMKNAVLA TEDNRFYQHG ALDYKRLFGA IGKNLTGGFG SQGASTLTQQ VVKDSFLTQQ KSIGRKAQEA YLSYRLEQEY SKDEIFQVYM NKIYYSDGVT GIKAAAKYYF NKDMKDLNLA EEAYLAGLPQ VPNLYNIYNN PKEANNRKDT VLYLMHKHNR INDKQYADAK KIDLKANLVE RTKKERQVTG NEKNPEYDSY VNFVQSELMN NKYFKDKNLG SVLQSGIKIY TNMDKDVQQT LQDRINNGSF YKNEDQQVGA TILDSKTGGL VAISGGRNYK NVVERNQATD PHPTGSSLKP FLAYGPAIEN MKWSTNHAIQ DESSYWVDGS QFKNYDTKGH GTVSIYDALR QSFNIPALKT WQQVKSQAGN DAPQKFASKL GLDYSGKIGP SEVLGGSSSE FSPTQLASAF AAIANGGTYN NAHSIQKVVT HEGDTIEYEH TSHKAMKDYT SYMLAEILKG TFKAYGSAYG HGVSGVNMGA KTGTGTYGQE IYEKYNLPDN AAKDVWINGF SPEYTMSVWM GFNKVKQYGT NSFIGHSEQD YPQYLYEDVM SSISSKDGED FKKPNDVQGS SPDSLSVSGH SDNNTTNRSV HGSSDTSSSS NGGSNSASSG NNSNSSNGTS QGNSGNAFTR LFNLNSIFDY KVS
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