Gene SERP0988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0988 
SymbolarlS 
ID3242088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1005701 
End bp1007071 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content30% 
IMG OID637167643 
Productsensor histidine kinase ArlS 
Protein accessionYP_188566 
Protein GI57866896 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.101467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAGC GTCAAAAATT AAAATATAAA TGGATGCTTA TTACGACGCT CATTACCTTC 
ACGACAATAT TACTTTTCTG CTTAATTATT ATTTTCTTTT TAAAAGATAC TTTACGAAGT
AGTGAAATTG ACGAAGCTGA AAGAAGTTCA AATGATATCG CCAATCTGTT CCATTCAAAA
TCTTTAAGTG ATATATCTGC ATTGGATTTA AATGCATCCT TAGAAAATTT TCAAGAAATA
TTGATTTATG ATGATAAGGG TAGAAAGTTA ATTCAAACAT CAAATGATAA TACACTTGCT
TATGATAACA AAATTGATTT CAAACATCCT GAACGTATAC ATATTCATAG AAGCCACGGT
ATTAATTACT TAGTAATAAC TGAACCTATA CGTTCGAAGG AATTTTCTGG ATACAGTGTA
TTAGTCCATT CTCTTCAAAA TTATGATAAT CTCGTTAAAT CACTTTATAT CGTTGCACTT
GCTTTTGGAT TAATTGCAAC CATTATAACC GCCGGCGTGA GTTATATCTT TTCTTCGCAA
ATTACTAAAC CAATAGTTAC AATGTCCAAT AAAATGAATC AAATTAGAAG AGATGGTTTT
CAAAATAAAC TTGAATTAAC TACAAATTAT GAAGAAACAG ACAATTTAAT TGATACCTTT
AATGAAATGA TGTATCAAAT AGAAGAATCT TTTAATCAGC AACGTCAATT TGTCGAGGAT
GCTTCACATG AATTAAGAAC GCCACTACAG ATTATTCAAG GTCATCTCAA TTTAATTCAA
CGTTGGGGAA AAAAAGATCC AGCAGTTTTG GAGGAATCTT TGAATATTTC AATTGAGGAA
GTGAATCGAA TAACAAAACT TGTCGAAGAA CTACTTTTAC TTACCAAAGA TAGAGTCAAT
CATAATGTTT TGGAATGTGA AAATGTAGAC ATAAATAGCG AGATTCAGTC ACGTGTGAAG
TCACTGCAAC ACCTACATCC AGATTATACC TTTGAAACAC ATCTTGCTAC TAAACCTATC
CAATTAAAAA TTAACCGTCA TCAGTTTGAA CAACTTTTAC TCATATTTAT TGATAATGCA
ATGAAATACG ATACTGAACA TAAGCACATT AAAATTGTTA CTCAACTAAA AAATAAAATG
ATTATGATTG ATATTACTGA TCATGGTATG GGTATACCAA AAGCTGACTT AGAATTTATC
TTTGATAGAT TTTATCGTGT AGATAAATCA CGTGCACGTA GTCAGGGAGG CAATGGATTA
GGACTATCAA TAGCTGAAAA AATTGTACAA CTTAACGGTG GTATGATTCA GGTTGAAAGT
GAACTACAAA ATTACACGAC TTTCAAAATC AGTTTTCCAG TACTAAATTA A
 
Protein sequence
MIKRQKLKYK WMLITTLITF TTILLFCLII IFFLKDTLRS SEIDEAERSS NDIANLFHSK 
SLSDISALDL NASLENFQEI LIYDDKGRKL IQTSNDNTLA YDNKIDFKHP ERIHIHRSHG
INYLVITEPI RSKEFSGYSV LVHSLQNYDN LVKSLYIVAL AFGLIATIIT AGVSYIFSSQ
ITKPIVTMSN KMNQIRRDGF QNKLELTTNY EETDNLIDTF NEMMYQIEES FNQQRQFVED
ASHELRTPLQ IIQGHLNLIQ RWGKKDPAVL EESLNISIEE VNRITKLVEE LLLLTKDRVN
HNVLECENVD INSEIQSRVK SLQHLHPDYT FETHLATKPI QLKINRHQFE QLLLIFIDNA
MKYDTEHKHI KIVTQLKNKM IMIDITDHGM GIPKADLEFI FDRFYRVDKS RARSQGGNGL
GLSIAEKIVQ LNGGMIQVES ELQNYTTFKI SFPVLN