Gene SERP0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0946 
SymbolfemA 
ID3242012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp961515 
End bp962768 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content30% 
IMG OID637167601 
ProductfemA protein 
Protein accessionYP_188524 
Protein GI57866903 
COG category[V] Defense mechanisms 
COG ID[COG2348] Uncharacterized protein involved in methicillin resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.70677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTTA CGAATTTGAC AGCTAAAGAA TTTAGTGACT TTACTGATCG TATGACATAT 
AGTCATTTTA CACAAATGGA AGGTAATTAC GAATTAAAGG TTGCTGAAGG TACCGAGTCA
CATTTAGTTG GAATTAAAAA TAATGATAAC GAAGTGATTG CAGCTTGTTT ATTAACAGCT
GTTCCTGTAA TGAAAATATT TAAATATTTT TATTCCAATC GCGGTCCAGT AATAGATTAT
AATAATAAAG AGCTTGTACA TTTTTTCTTT AATGAATTGA GTAAATATGT AAAAAAATAT
AATTGTTTAT ATTTAAGAGT TGACCCATAC CTTCCATATC AATATTTAAA TCATGAGGGA
GAAATAACTG GAAATGCAGG TCATGATTGG ATTTTTGATG AATTAGAGAG TTTAGGATAT
AAACACGAAG GATTCCACAA AGGATTTGAT CCTGTATTAC AAATCCGATA TCATTCTGTT
CTAAATTTAG CAAACAAAAG TGCTAATGAT GTTTTAAAAA ACATGGATGG TTTAAGAAAG
CGTAATACTA AAAAAGTTAA GAAAAATGGA GTTAAAGTCC GCTTTTTATC TGAAGAAGAG
TTACCTATAT TTAGGTCATT TATGGAGGAT ACCTCTGAAA CTAAAGATTT TGCAGATAGA
GAAGATAGTT TTTATTACAA CAGATTCAAA CATTATAAAG ACCGTGTTTT AGTACCACTA
GCCTATATTA ACTTTGATGA GTATATAGAG GAACTAAATA ATGAAAGAAA TGTGCTTAAT
AAAGATTATA ATAAAGCTTT AAAAGACATT GAGAAACGTC CAGAGAATAA AAAAGCACAT
AACAAAAAGG AAAATTTAGA ACAACAACTC GATGCAAATC AGCAAAAAAT TAATGAAGCT
AAAAACTTAA AACAAGAACA TGGCAATGAA TTACCCATCT CTGCTGGCTT CTTTATAATT
AATCCGTTTG AAGTAGTTTA CTACGCTGGT GGAACTTCAA ATCGTTATCG CCATTTTGCA
GGGAGCTATG CGGTTCAATG GAAGATGATT AACTATGCAA TTGAACATGG TATTAATCGG
TATAATTTCT ATGGTATTAG TGGTGACTTT AGTGAAGATG CTGAAGATGC TGGCGTAGTT
AAGTTTAAAA AGGGCTATGA TGCCGATGTT ATAGAATACG TTGGTGACTT TATTAAACCT
ATTAATAAAC CAATGTATAA CATTTATAGA ACACTTAAAA AACTAAAGAA ATAG
 
Protein sequence
MKFTNLTAKE FSDFTDRMTY SHFTQMEGNY ELKVAEGTES HLVGIKNNDN EVIAACLLTA 
VPVMKIFKYF YSNRGPVIDY NNKELVHFFF NELSKYVKKY NCLYLRVDPY LPYQYLNHEG
EITGNAGHDW IFDELESLGY KHEGFHKGFD PVLQIRYHSV LNLANKSAND VLKNMDGLRK
RNTKKVKKNG VKVRFLSEEE LPIFRSFMED TSETKDFADR EDSFYYNRFK HYKDRVLVPL
AYINFDEYIE ELNNERNVLN KDYNKALKDI EKRPENKKAH NKKENLEQQL DANQQKINEA
KNLKQEHGNE LPISAGFFII NPFEVVYYAG GTSNRYRHFA GSYAVQWKMI NYAIEHGINR
YNFYGISGDF SEDAEDAGVV KFKKGYDADV IEYVGDFIKP INKPMYNIYR TLKKLKK