Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0946 |
Symbol | femA |
ID | 3242012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 961515 |
End bp | 962768 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637167601 |
Product | femA protein |
Protein accession | YP_188524 |
Protein GI | 57866903 |
COG category | [V] Defense mechanisms |
COG ID | [COG2348] Uncharacterized protein involved in methicillin resistance |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.70677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTTA CGAATTTGAC AGCTAAAGAA TTTAGTGACT TTACTGATCG TATGACATAT AGTCATTTTA CACAAATGGA AGGTAATTAC GAATTAAAGG TTGCTGAAGG TACCGAGTCA CATTTAGTTG GAATTAAAAA TAATGATAAC GAAGTGATTG CAGCTTGTTT ATTAACAGCT GTTCCTGTAA TGAAAATATT TAAATATTTT TATTCCAATC GCGGTCCAGT AATAGATTAT AATAATAAAG AGCTTGTACA TTTTTTCTTT AATGAATTGA GTAAATATGT AAAAAAATAT AATTGTTTAT ATTTAAGAGT TGACCCATAC CTTCCATATC AATATTTAAA TCATGAGGGA GAAATAACTG GAAATGCAGG TCATGATTGG ATTTTTGATG AATTAGAGAG TTTAGGATAT AAACACGAAG GATTCCACAA AGGATTTGAT CCTGTATTAC AAATCCGATA TCATTCTGTT CTAAATTTAG CAAACAAAAG TGCTAATGAT GTTTTAAAAA ACATGGATGG TTTAAGAAAG CGTAATACTA AAAAAGTTAA GAAAAATGGA GTTAAAGTCC GCTTTTTATC TGAAGAAGAG TTACCTATAT TTAGGTCATT TATGGAGGAT ACCTCTGAAA CTAAAGATTT TGCAGATAGA GAAGATAGTT TTTATTACAA CAGATTCAAA CATTATAAAG ACCGTGTTTT AGTACCACTA GCCTATATTA ACTTTGATGA GTATATAGAG GAACTAAATA ATGAAAGAAA TGTGCTTAAT AAAGATTATA ATAAAGCTTT AAAAGACATT GAGAAACGTC CAGAGAATAA AAAAGCACAT AACAAAAAGG AAAATTTAGA ACAACAACTC GATGCAAATC AGCAAAAAAT TAATGAAGCT AAAAACTTAA AACAAGAACA TGGCAATGAA TTACCCATCT CTGCTGGCTT CTTTATAATT AATCCGTTTG AAGTAGTTTA CTACGCTGGT GGAACTTCAA ATCGTTATCG CCATTTTGCA GGGAGCTATG CGGTTCAATG GAAGATGATT AACTATGCAA TTGAACATGG TATTAATCGG TATAATTTCT ATGGTATTAG TGGTGACTTT AGTGAAGATG CTGAAGATGC TGGCGTAGTT AAGTTTAAAA AGGGCTATGA TGCCGATGTT ATAGAATACG TTGGTGACTT TATTAAACCT ATTAATAAAC CAATGTATAA CATTTATAGA ACACTTAAAA AACTAAAGAA ATAG
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Protein sequence | MKFTNLTAKE FSDFTDRMTY SHFTQMEGNY ELKVAEGTES HLVGIKNNDN EVIAACLLTA VPVMKIFKYF YSNRGPVIDY NNKELVHFFF NELSKYVKKY NCLYLRVDPY LPYQYLNHEG EITGNAGHDW IFDELESLGY KHEGFHKGFD PVLQIRYHSV LNLANKSAND VLKNMDGLRK RNTKKVKKNG VKVRFLSEEE LPIFRSFMED TSETKDFADR EDSFYYNRFK HYKDRVLVPL AYINFDEYIE ELNNERNVLN KDYNKALKDI EKRPENKKAH NKKENLEQQL DANQQKINEA KNLKQEHGNE LPISAGFFII NPFEVVYYAG GTSNRYRHFA GSYAVQWKMI NYAIEHGINR YNFYGISGDF SEDAEDAGVV KFKKGYDADV IEYVGDFIKP INKPMYNIYR TLKKLKK
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