Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0944 |
Symbol | |
ID | 3242010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 960583 |
End bp | 961242 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637167599 |
Product | ThiJ/PfpI family protein |
Protein accession | YP_188522 |
Protein GI | 57866901 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAA AAGTTTTATT TGTTTTAACA AGTACAAGTC AATTTACAGA CGGTACAGAA ACTGGATTAT GGTTAGAAGA AGCTGGAGCA CCATATAATA TATTGACTGA AGAAGGTATC AATGTTGATG TTATTTCTAT TAAAGGTGGA AAAGTAAATC TTGATCCTAA TTCTGTTTCT AATGAATCAC TGAATCAGTA TGCTAAATTC GTGTCACACT TAAACGATAC ACCTAGTATC GAAAATGTAA ATGCAGATGA GTATGACGCT ATTTATCTAC CAGGTGGACA TGGTACTGTA TACGATTTTG CCAATAATGA GAAATTAGCT GATATTTTAC TTCAATTTAA AAATAGTAAT AAAATAATCT CTTCAGTATG TCATGGACCT AGTGTGTTTG TAGGTGTAAA AGATGCAAAT AATCACTATC TAGTAGATGG TGTCAAAATA ACTTCATTTA CTGATAGTGA AGAAAAAGCA ATGGGATTTG AAAATAAAGT ACCATTTTTA ACTCAATCTA AATTAGAAGA GCAAGGTGCA AATTTTGTAG TGAAAGATGA CTTTACATCT CACGTAGAAA AAGACGGTCA ATTTATCACT GGACAAAATC CCCAATCAAG TGAAGACATT GGTAAAGCAC TTGCAAATGA ATTAAAATAA
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Protein sequence | MSKKVLFVLT STSQFTDGTE TGLWLEEAGA PYNILTEEGI NVDVISIKGG KVNLDPNSVS NESLNQYAKF VSHLNDTPSI ENVNADEYDA IYLPGGHGTV YDFANNEKLA DILLQFKNSN KIISSVCHGP SVFVGVKDAN NHYLVDGVKI TSFTDSEEKA MGFENKVPFL TQSKLEEQGA NFVVKDDFTS HVEKDGQFIT GQNPQSSEDI GKALANELK
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