Gene SERP0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0930 
SymbolfmtC 
ID3242065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp945777 
End bp948299 
Gene Length2523 bp 
Protein Length840 aa 
Translation table11 
GC content30% 
IMG OID637167586 
ProductfmtC protein 
Protein accessionYP_188509 
Protein GI57866874 
COG category[S] Function unknown 
COG ID[COG2898] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAG AATTAAAAAG TAAATTACTT TCTTTTTTTA AATTTATTTT CGCCACTGCT 
TTATTTATCT TTGTAATTTT TACACTCTAT AGAGAATTAT CACATATCAA TTTTAAAGAG
ACATTCATAC AGTTCGGCAA AATTAATAGA TTATGGCTCG TACTACTATT TGCTGGTGGG
GGACTGTCAC TCATCTTATT ATCACTGTAC GATATTATTT TAGTAAAGGC TCTTAAACTT
AAAATGCCGT TGATTAGAGT CTTTAGAGTG AGTTATATTA TCAACGCCCT TAATTCTATA
ATTGGTTTTG GAGGGTTTAT AGGTGCAGGC GTAAGAGCTT TTGTGTATAA AAATTATACT
AATGACACGA AAAAACTTGT ACAATATATT TCTATTATTT TAGTATCTAT GCTTACGGGA
TTAAGTTTAT TATCCATCTT AGTTGTCCTG CGTATATTTA ATGCTTCTCA CATGATTGAT
GAAATTTCGT GGGTACGTTG GATTTTATAT ATTGTTGCAT TATTTTTACC AATTTTTATT
TTTTATACCG TCGCACGACC TGTAGATAGA AATAATCGTT ATATGGGTGT GTATTGTACA
GTTGTATCAT GTGTTGAGTG GATGGCAGCA GCTACTGTAT TATATTTTGC TGCATTGATT
GTCGATATAC ATATCTCATT TATGACTTTT GTAGGTATAT TTGTTATTGC AGCTTTATCT
GGTTTAGTTA GTTTTATTCC AGGTGGTTTT GGCGCGTTTG ATTTAGTCGT GTTACTAGGA
CTGAAATCAC TTGGTATTTC TGAAGAAAAG ATACTTCTAG CATTAGTTTT ATATCGATTT
GCTTATTATT TTGTGCCAGT GATGATTGCG CTTATACTAT CTTCATTTGA ATTTGGAAAT
ACTGCTAAAA AATATCTCGA CAATTCGAAG TACTTTATAC CTGTAAAAGA CTTCACTTCA
TTTTTGAGGT CTTATCAGAA AGATATTTTA GCTAAAGTGC CTTCATTTTC GTTAGCGATT
TTAATATTTT TAACTAGTAT TATTTTCTTT ATTAACAATT TAACTATTGT CTATGATGGA
TTGTATGATG GAAATCATTT TGCCTATTAT ATTGCTTTAG CTATACAAAC GAGTGCTTGT
TTGTTACTTA TTTTAAATGT AAGAGGTATT TATAAAGGCA GTCGTCGTGC AATAATTTAT
GCCTTTATTT CTATTATTTT AATTGCTAGT GCGACTATAT ATACTTATGC GTCATTTTTA
TTATTGTCAT GGCTCATTAT CATATTTGTG TTACTGATTT TAGCTTATCA ACGTGCGCAA
GTACTTAAAC GACCATTACG CTTTAAAAAG TTGGCGTTTA TGCTACTTCT TAGTATCTTT
ATTCTTTATT TAAATCATAT TTTAATATCA GGAACTTTAT ATGCATTAGA TGTTTATCAT
ATTGAGATTG ATACGTCTTT ATTACGATAT TACTTTTGGA TGACCATTGT TATTATTATG
CTACTCGTTG GCGTTATTGC TTGGCTTTTT GACTATAAGT ATAAACGCCC TCATCATAGC
ATTGATTTAA CACTTTGCGA TGCAATTATT CAAAAATACG GTGGTAATTA TTTAAGTCAC
CTTGTTTATA GTGGTGACAA AGATTGTTTC TTTAATGAAA ATAAAGATTC TTTTATTATG
TATCGATATA AGTCCAATGC CCTTGTCGTT TTGGGTGATC CAATTGGCAA TACTAAATCA
TTCGAGTCAT TATTAGAAGC ATTTTATCAG TTTGCAGAGT ATCAAGGTTA TGAGATTATT
TTTTATCAAA TAAGTGATCA ATATATGCCT TTATATCATA ATTTTGGGAA TCAATTCTTC
AAATTAGGTG AAGAAGCTAT TATTGATTTA ACAACGTTTA CAACATCTGG TAAAAAGCGA
CGTGGTTTCA GAGCGACGCT CAATAAATTT GATGATTTAA ATATCAATTT TGAAATTATT
GAACCACCAT TTACTCAAGA TTTCTTTGAT GAACTTAAAT TTGTGAGTGA TAAATGGTTG
GATGGAAGAA GTGAAATGCA TTTTTCTGTA GGTCAATTTA CTCAAACTTA TTTATCGAAA
GCACCTATTG GAGTAATGAG AGATCATTCT GGCAAGATGA TTGCATTTTG TAGTTTGATG
CCTACTTATT CTAATAATGC AATATCTGTT GATTTAATTA GATGGTTGCC TGAATTGGAT
TTACCTTTAA TGGATGGATT ATATCTTCAT ATGTTGTTAT GGAGTAAAGA AAAGGGGTAT
AAAGCATTTA ATATGGGAAT GGCGACACTC TCGAATGTAG GTCAATTGCA TTATTCTTAT
TTAAGAGAGA GAATGGCAGG ACGTGTATTT GAACATTTCA ATGGTTTATA TCGTTTTCAA
GGATTAAGAC GTTATAAAGA AAAATATAGC CCCAATTGGG AACCTAGATT TTTAGTTTAT
CAAAAGCATT ATTCTCTGTG GGAGAGTATG CTTAAAGTGA TGAGAGTCAT ACGCCATAAA
TAA
 
Protein sequence
MTQELKSKLL SFFKFIFATA LFIFVIFTLY RELSHINFKE TFIQFGKINR LWLVLLFAGG 
GLSLILLSLY DIILVKALKL KMPLIRVFRV SYIINALNSI IGFGGFIGAG VRAFVYKNYT
NDTKKLVQYI SIILVSMLTG LSLLSILVVL RIFNASHMID EISWVRWILY IVALFLPIFI
FYTVARPVDR NNRYMGVYCT VVSCVEWMAA ATVLYFAALI VDIHISFMTF VGIFVIAALS
GLVSFIPGGF GAFDLVVLLG LKSLGISEEK ILLALVLYRF AYYFVPVMIA LILSSFEFGN
TAKKYLDNSK YFIPVKDFTS FLRSYQKDIL AKVPSFSLAI LIFLTSIIFF INNLTIVYDG
LYDGNHFAYY IALAIQTSAC LLLILNVRGI YKGSRRAIIY AFISIILIAS ATIYTYASFL
LLSWLIIIFV LLILAYQRAQ VLKRPLRFKK LAFMLLLSIF ILYLNHILIS GTLYALDVYH
IEIDTSLLRY YFWMTIVIIM LLVGVIAWLF DYKYKRPHHS IDLTLCDAII QKYGGNYLSH
LVYSGDKDCF FNENKDSFIM YRYKSNALVV LGDPIGNTKS FESLLEAFYQ FAEYQGYEII
FYQISDQYMP LYHNFGNQFF KLGEEAIIDL TTFTTSGKKR RGFRATLNKF DDLNINFEII
EPPFTQDFFD ELKFVSDKWL DGRSEMHFSV GQFTQTYLSK APIGVMRDHS GKMIAFCSLM
PTYSNNAISV DLIRWLPELD LPLMDGLYLH MLLWSKEKGY KAFNMGMATL SNVGQLHYSY
LRERMAGRVF EHFNGLYRFQ GLRRYKEKYS PNWEPRFLVY QKHYSLWESM LKVMRVIRHK