Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0930 |
Symbol | fmtC |
ID | 3242065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 945777 |
End bp | 948299 |
Gene Length | 2523 bp |
Protein Length | 840 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637167586 |
Product | fmtC protein |
Protein accession | YP_188509 |
Protein GI | 57866874 |
COG category | [S] Function unknown |
COG ID | [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAAG AATTAAAAAG TAAATTACTT TCTTTTTTTA AATTTATTTT CGCCACTGCT TTATTTATCT TTGTAATTTT TACACTCTAT AGAGAATTAT CACATATCAA TTTTAAAGAG ACATTCATAC AGTTCGGCAA AATTAATAGA TTATGGCTCG TACTACTATT TGCTGGTGGG GGACTGTCAC TCATCTTATT ATCACTGTAC GATATTATTT TAGTAAAGGC TCTTAAACTT AAAATGCCGT TGATTAGAGT CTTTAGAGTG AGTTATATTA TCAACGCCCT TAATTCTATA ATTGGTTTTG GAGGGTTTAT AGGTGCAGGC GTAAGAGCTT TTGTGTATAA AAATTATACT AATGACACGA AAAAACTTGT ACAATATATT TCTATTATTT TAGTATCTAT GCTTACGGGA TTAAGTTTAT TATCCATCTT AGTTGTCCTG CGTATATTTA ATGCTTCTCA CATGATTGAT GAAATTTCGT GGGTACGTTG GATTTTATAT ATTGTTGCAT TATTTTTACC AATTTTTATT TTTTATACCG TCGCACGACC TGTAGATAGA AATAATCGTT ATATGGGTGT GTATTGTACA GTTGTATCAT GTGTTGAGTG GATGGCAGCA GCTACTGTAT TATATTTTGC TGCATTGATT GTCGATATAC ATATCTCATT TATGACTTTT GTAGGTATAT TTGTTATTGC AGCTTTATCT GGTTTAGTTA GTTTTATTCC AGGTGGTTTT GGCGCGTTTG ATTTAGTCGT GTTACTAGGA CTGAAATCAC TTGGTATTTC TGAAGAAAAG ATACTTCTAG CATTAGTTTT ATATCGATTT GCTTATTATT TTGTGCCAGT GATGATTGCG CTTATACTAT CTTCATTTGA ATTTGGAAAT ACTGCTAAAA AATATCTCGA CAATTCGAAG TACTTTATAC CTGTAAAAGA CTTCACTTCA TTTTTGAGGT CTTATCAGAA AGATATTTTA GCTAAAGTGC CTTCATTTTC GTTAGCGATT TTAATATTTT TAACTAGTAT TATTTTCTTT ATTAACAATT TAACTATTGT CTATGATGGA TTGTATGATG GAAATCATTT TGCCTATTAT ATTGCTTTAG CTATACAAAC GAGTGCTTGT TTGTTACTTA TTTTAAATGT AAGAGGTATT TATAAAGGCA GTCGTCGTGC AATAATTTAT GCCTTTATTT CTATTATTTT AATTGCTAGT GCGACTATAT ATACTTATGC GTCATTTTTA TTATTGTCAT GGCTCATTAT CATATTTGTG TTACTGATTT TAGCTTATCA ACGTGCGCAA GTACTTAAAC GACCATTACG CTTTAAAAAG TTGGCGTTTA TGCTACTTCT TAGTATCTTT ATTCTTTATT TAAATCATAT TTTAATATCA GGAACTTTAT ATGCATTAGA TGTTTATCAT ATTGAGATTG ATACGTCTTT ATTACGATAT TACTTTTGGA TGACCATTGT TATTATTATG CTACTCGTTG GCGTTATTGC TTGGCTTTTT GACTATAAGT ATAAACGCCC TCATCATAGC ATTGATTTAA CACTTTGCGA TGCAATTATT CAAAAATACG GTGGTAATTA TTTAAGTCAC CTTGTTTATA GTGGTGACAA AGATTGTTTC TTTAATGAAA ATAAAGATTC TTTTATTATG TATCGATATA AGTCCAATGC CCTTGTCGTT TTGGGTGATC CAATTGGCAA TACTAAATCA TTCGAGTCAT TATTAGAAGC ATTTTATCAG TTTGCAGAGT ATCAAGGTTA TGAGATTATT TTTTATCAAA TAAGTGATCA ATATATGCCT TTATATCATA ATTTTGGGAA TCAATTCTTC AAATTAGGTG AAGAAGCTAT TATTGATTTA ACAACGTTTA CAACATCTGG TAAAAAGCGA CGTGGTTTCA GAGCGACGCT CAATAAATTT GATGATTTAA ATATCAATTT TGAAATTATT GAACCACCAT TTACTCAAGA TTTCTTTGAT GAACTTAAAT TTGTGAGTGA TAAATGGTTG GATGGAAGAA GTGAAATGCA TTTTTCTGTA GGTCAATTTA CTCAAACTTA TTTATCGAAA GCACCTATTG GAGTAATGAG AGATCATTCT GGCAAGATGA TTGCATTTTG TAGTTTGATG CCTACTTATT CTAATAATGC AATATCTGTT GATTTAATTA GATGGTTGCC TGAATTGGAT TTACCTTTAA TGGATGGATT ATATCTTCAT ATGTTGTTAT GGAGTAAAGA AAAGGGGTAT AAAGCATTTA ATATGGGAAT GGCGACACTC TCGAATGTAG GTCAATTGCA TTATTCTTAT TTAAGAGAGA GAATGGCAGG ACGTGTATTT GAACATTTCA ATGGTTTATA TCGTTTTCAA GGATTAAGAC GTTATAAAGA AAAATATAGC CCCAATTGGG AACCTAGATT TTTAGTTTAT CAAAAGCATT ATTCTCTGTG GGAGAGTATG CTTAAAGTGA TGAGAGTCAT ACGCCATAAA TAA
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Protein sequence | MTQELKSKLL SFFKFIFATA LFIFVIFTLY RELSHINFKE TFIQFGKINR LWLVLLFAGG GLSLILLSLY DIILVKALKL KMPLIRVFRV SYIINALNSI IGFGGFIGAG VRAFVYKNYT NDTKKLVQYI SIILVSMLTG LSLLSILVVL RIFNASHMID EISWVRWILY IVALFLPIFI FYTVARPVDR NNRYMGVYCT VVSCVEWMAA ATVLYFAALI VDIHISFMTF VGIFVIAALS GLVSFIPGGF GAFDLVVLLG LKSLGISEEK ILLALVLYRF AYYFVPVMIA LILSSFEFGN TAKKYLDNSK YFIPVKDFTS FLRSYQKDIL AKVPSFSLAI LIFLTSIIFF INNLTIVYDG LYDGNHFAYY IALAIQTSAC LLLILNVRGI YKGSRRAIIY AFISIILIAS ATIYTYASFL LLSWLIIIFV LLILAYQRAQ VLKRPLRFKK LAFMLLLSIF ILYLNHILIS GTLYALDVYH IEIDTSLLRY YFWMTIVIIM LLVGVIAWLF DYKYKRPHHS IDLTLCDAII QKYGGNYLSH LVYSGDKDCF FNENKDSFIM YRYKSNALVV LGDPIGNTKS FESLLEAFYQ FAEYQGYEII FYQISDQYMP LYHNFGNQFF KLGEEAIIDL TTFTTSGKKR RGFRATLNKF DDLNINFEII EPPFTQDFFD ELKFVSDKWL DGRSEMHFSV GQFTQTYLSK APIGVMRDHS GKMIAFCSLM PTYSNNAISV DLIRWLPELD LPLMDGLYLH MLLWSKEKGY KAFNMGMATL SNVGQLHYSY LRERMAGRVF EHFNGLYRFQ GLRRYKEKYS PNWEPRFLVY QKHYSLWESM LKVMRVIRHK
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