| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0918 |
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| Symbol | sbcC |
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| ID | 3241520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 926581 |
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| End bp | 929610 |
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| Gene Length | 3030 bp |
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| Protein Length | 1009 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 637167574 |
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| Product | exonuclease SbcC |
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| Protein accession | YP_188497 |
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| Protein GI | 57866847 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.286851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGCCTT TACATATAGT TATGGAGAAC TTTGGCCCTT TTATTAAAGA AACTATTGAT
TTTGAGCAAG TTGAAACTGA TCAACTCTTT TTAATTAGTG GTAAAACTGG ATCTGGTAAA
ACAATGATTT TTGATGCTAT AGTATACGCA TTATACGGTA TGGCTTCGAC CAAAACTAGA
AAAGAAGGAG ATTTAAGAAG TCATTTTGCA GACGGTAAAT CGCCAATGTC TGTAATTTAT
CAATTTAAAG TTAATAATCA AACTTTTAAA ATTCATAGAG AAGCGCCATT TATTAAAGAG
GGGAATATAA CTAAAACACA AGCCAAGTTA AATATATATG AATTAGTTGA TAATCAATTT
GAATTAAGAG AAAGTAAAGT GAATCAAGGT AATCAATTTA TCGTACAATT ATTAGGCGTT
AATGCTGAAC AATTTCGTCA ATTATTTATT TTGCCTCAAG GAGAATTTAA AAAGTTTCTT
CAGTCAAATA GTAAAGACAA ACAATCGATT CTTAGAACAC TTTTTAATAG TGAGCGATTT
GATGAGATTA GACATCTACT TGTAGAAAAT GTAAAGCAAG AAAAAGTACA AATTGAAAAT
AGATACACTC AAATTGAAAA TTTATGGAAT GATATAGATA CATTTAATAA TGATGAATTG
GCCTTATATA AAGAATTAGA GAGTTCTCAG ACAGATAAAA TGATTGAAAA ATTCCCACAA
TTTAATGATT ATGGATGCAA AATTCTCAAG TCATTTGAAG AAGCTAAGAA TAAAATAACT
AAGGAATTAG ATGATTTAAA TCATAAATAT AAAGTGAATG TTGAATTAAG TGAGAATACT
AAAAAATTAA AAGCGGAAAA AATCAAATTT GACGATTTGA AAAAAGAACA AAATTATATT
GATAAATTAA AGCAAGAATT AAAAATGATT CAGGAATCTA AAGTATTAAT CACTTATTTT
ACTAGGTTAC AAAGTTTAAA AAAAGATAAA GATGAATTAG TGTCACTTCA TGAGCAATCA
AAATTAAACG AAACAAACTA TCACAATGAA ATTAAAGGTT TTCAAAAACA ACTCGAACAT
TTATCAACAC GAGAAAATGA AATAACTCAA TTTAATCAGT ATCTAGAAAA AAACCAAGTT
TTCTTCAATC AATTAGATAA GATTATTAGT AGTTATCAAC AAAAACCGGT AATTGAAGAA
GAAATAAAAA GATTATACAG TGAATATAAT GATTTAATAA CCAAAAAAGA AGAATTGACG
AAAGAAATGA ACAACAAGAA CAAAGATTTT GCAATTATTG AACATTACAC TGAAGAGATT
TATAAGCTGA AAAAGATTAT AGATGAATCT GAAAGACAAA AAAAGGATGA GAAATTATTT
GATAAATTAC AACTAGATAA ATCATCTTAT CTTAGCAAAT TAAAAGAGAA GAAAGAACAG
TTAAATGAAA TTGAATCATC AATCACCAAT ATAGATGCGA CTTTAATTGA TTTGAATGAC
AAAAAGGATT TTGTAAATGA AATAAAGTCC GCTATGTCAA TTGGAGATAC CTGTCCAATT
TGTGGTAATG AAATACATTC ATTGGGAGAA CATATTGATT TTGAATCAAT TGCTCAAAAA
AATAATAAAA TAAAACGGTT AGAAAGTAAG AAGGTAAAAA TTCGTGATGA AATAATCAAA
ATAGAAACTC GAATTGAAGA ATTAAATCAT AGAGAAAATG AATTAAATTT TGAGAAACAA
GAAAAGAAGG ATATTAGTGA GCTTCAAAAA CAGCTTAATC ATTTGAATCA ACTAAAAGAC
GAGCAACAAA GCATAAATAA GTTAGTAGAA AATTTTGAGA AACAAGAAAA AGAAATAGTT
AATAAAATAC ATCAGTTTGA TTTAGATTTG AGTCGAAAGA ACACGCAAAA AGAAAAACTG
GAAATTCAAA TTAATGATTT TGAACGACAT TCACAATTTT CATCAGTAAA TGATTTTGAA
ACTTATTATT CTCATGCTAA AAAACAAGTT GAGACGTATG AGTATGAGAA TGAGAAAACT
AAAGATAAAT TGAACGAGTT GAATAATAAG TTAAAGATAG AAATGAATGA TCAAAAACAT
TTAACTGAGA ATTTAACTCA AACAAGTAAG GAAATAAATA ATTTAGAATT AAAAATGGAA
AAAGAAATGC AACAACTTGG TTTTGAGTCT TATGATCAAG TCAAAAGCGC TGCAGATTTA
AGTGCTCAAA AAGATGAAAT AGAAAGAGAA ATTAATATTT ATAATAAGAA CTATCAAAGT
TATGAAATAG AGATTAACAG ACTCAAAGAA TTGGTTAAGG GCAAAAAATT ATTAAATTTA
GAAGAATTAC GACAATCTAT AGAAAAAACA AACTTGAAAC TAGATGAAAC GAATTCACAA
ATAGCTACGA TTAGCTATAA AATAGATAAT AACTCTAACA AATTTAATAA AATAAAAAAT
ATAATTCAGA TTCTCGATGA TGAATTAAAA GTGCAAAAAG AAATTTTCTT GCTATCAGAA
ATATTAGCTG GTAAAAATGA TTATAAATTA ACACTAGAAA ATTATGTTTT AATTTATTAC
TTGGAAAAAA TAATTTTTCA AGCGAATCAA CGACTTTCAT TTATGAGTGG AAATAGATAT
CAACTGATTA GAAGAGAGGC CATTTCCTTA GGGTTAAGTG GATTGGAAAT TGACGTGTTT
GATTTTCATT CAAATAAATC GAGACACATA AGTTCACTTT CAGGAGGAGA AACATTTCAA
GCATCACTAG CTTTAGCTTT AGGATTAAGT GAAGTTGTAC AACAAGAATC AGGTGGAATC
ACTTTAGATT CTATGTTTAT AGATGAAGGA TTTGGCACTT TAGATCAAGA AACACTCGAA
ACTGCGATAG ATACATTAAT TAATTTAAAA TCATCTGGGC GCATGGTTGG TATAATCTCA
CATGTAAGCG AACTTAAGCA ACGCATACCT TTGATTTTAG AAGTGACAAG TAACCAATAC
GAAAGTCATA CACAATTTAG AAAAAATTAA
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| Protein sequence | MKPLHIVMEN FGPFIKETID FEQVETDQLF LISGKTGSGK TMIFDAIVYA LYGMASTKTR
KEGDLRSHFA DGKSPMSVIY QFKVNNQTFK IHREAPFIKE GNITKTQAKL NIYELVDNQF
ELRESKVNQG NQFIVQLLGV NAEQFRQLFI LPQGEFKKFL QSNSKDKQSI LRTLFNSERF
DEIRHLLVEN VKQEKVQIEN RYTQIENLWN DIDTFNNDEL ALYKELESSQ TDKMIEKFPQ
FNDYGCKILK SFEEAKNKIT KELDDLNHKY KVNVELSENT KKLKAEKIKF DDLKKEQNYI
DKLKQELKMI QESKVLITYF TRLQSLKKDK DELVSLHEQS KLNETNYHNE IKGFQKQLEH
LSTRENEITQ FNQYLEKNQV FFNQLDKIIS SYQQKPVIEE EIKRLYSEYN DLITKKEELT
KEMNNKNKDF AIIEHYTEEI YKLKKIIDES ERQKKDEKLF DKLQLDKSSY LSKLKEKKEQ
LNEIESSITN IDATLIDLND KKDFVNEIKS AMSIGDTCPI CGNEIHSLGE HIDFESIAQK
NNKIKRLESK KVKIRDEIIK IETRIEELNH RENELNFEKQ EKKDISELQK QLNHLNQLKD
EQQSINKLVE NFEKQEKEIV NKIHQFDLDL SRKNTQKEKL EIQINDFERH SQFSSVNDFE
TYYSHAKKQV ETYEYENEKT KDKLNELNNK LKIEMNDQKH LTENLTQTSK EINNLELKME
KEMQQLGFES YDQVKSAADL SAQKDEIERE INIYNKNYQS YEIEINRLKE LVKGKKLLNL
EELRQSIEKT NLKLDETNSQ IATISYKIDN NSNKFNKIKN IIQILDDELK VQKEIFLLSE
ILAGKNDYKL TLENYVLIYY LEKIIFQANQ RLSFMSGNRY QLIRREAISL GLSGLEIDVF
DFHSNKSRHI SSLSGGETFQ ASLALALGLS EVVQQESGGI TLDSMFIDEG FGTLDQETLE
TAIDTLINLK SSGRMVGIIS HVSELKQRIP LILEVTSNQY ESHTQFRKN
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