Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0856 |
Symbol | |
ID | 3242645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 866996 |
End bp | 868756 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637167515 |
Product | pyruvate ferredoxin oxidoreductase, alpha subunit |
Protein accession | YP_188438 |
Protein GI | 57866794 |
COG category | [C] Energy production and conversion |
COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.332292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAC AAATATCATG GAAAGTGGGC GGTCAGCAAG GCGAAGGTAT TGAATCTACC GGTGAAATCT TTGCTACTGC GATGAATAGA AAAGGTTATT TTTTGTATGG ATATAGACAC TTTTCTAGTC GTATAAAAGG TGGCCATACT AATAATAAGA TAAGAGTTTC AAAATCGCCT GTGCATGCGA TTAGTGATGA TTTGGATATA CTCATTGCTT TTGACCAGGA AACGATTGAA TTAAATCATC ATGAAATGAG AGAAGATAGT ATTATAATTG CGGATTCTAA AGCAAAACCC CAAAAGCCAG AGAACTGTGT GGCTCAATTA ATTGAGTTAC CATTCACTAG CACGGCAAAG GAACTTGGAA CAGCATTAAT GAAGAATATG GTGGCAATTG GTGCGACATC TGCACTGATG GATTTAAATA CATCAACTTT TGAAACTTTA ATCGATAACA TGTTTTCAAA AAAAGGTAAT AAAGTCGTTG ATATGAATAT ACAAGCCCTT AATATGGGTT ATGATTTAAT GAAGCAACAA GTTACCAACG TTAATGGAGA CTTTACATTA GAGAATGGTA GCGGTCATCC TCATTTATAT ATGATAGGTA ATGACGCAAT CGGATTAGGA GCAATAGCAG CTGGATCAAG ATTTATGTCC GCTTATCCAA TTACGCCAGC TTCTGAAATT ATGGAATACA TGATTGCCAA TCTACCTAAA GTTGATGGTA CTGTTGTTCA AACTGAAGAT GAAATAGCAG CAGCAACGAT GGCGATTGGA GCTAACTATG CTGGCGTACG AGGCTTTACA GCGAGTGCGG GTCCAGGTCT TTCTTTAATG ATGGAATCTA TTGGATTGTC TGGTATGACT GAAACGCCAT TAGTCATTAT TAATACTCAA AGAGGTGGTC CTTCTACTGG CTTACCAACA AAGCAAGAAC AATCAGATTT AATGCAAATG ATTTATGGTA CCCATGGTGA TATTCCGAAA ATTGTCGTTG CTCCTACAGA TGCTGAAGAT GCGTTTTATC TTACTATGGA AGCATTTAAT TTAGCTGAAG AATACCAATG TCCAGTCATT CTGTTAAGTG ATTTACAATT ATCATTAGGA AAACAAACTG TTAAAACACT CGATTATAAT AAAATCGATA TTCGTCGTGG AGAAATAATA CAGTCAGATA TCGAGAGAGC TGAAGATGAT AAAGCATACT TTAAAAGATA TGCATTAACA GCTAGTGGCG TATCACCACG ACCAATACCA GGTGTTAAAG GTGGTATACA TCATGTAACA GGTGTTGAAC ATAATGAAGA AGGGAAGCCA AGTGAGGCGC CTATGAATCG TCAGAATCAG ATGGAAAAAC GAATGCGCAA AACTGAAAGC TTGGTTATCA ATAATCCTGT GTTACTCAAT GAACATGAAG ACGAAGCAGA TATACTGTAT ATAGGATTTA TATCTACTAA AGGTGCTATT GGAGAAGGTG CAGAAAGACT AGAACGACAT GGTGTAAAAG TGAATACGAT GCATATTCGA CAATTACATC CTTTCCCTAA AGATATTGTT CAACAAGCTA TTAATAAAGC TTCGAAAGTA ATAGTTGCAG AACATAATTA TCAAGGACAA TTATCAAGTA TTTTAAAAAT GAACACACAA GTTAATGATA AATTAGTTAA TCAAACAAAA TACGATGGGA AACCTTTCTT ACCTTATGAA ATTGAAGAAA AAGGTTTGGA AATTGCTAAA GAGTTAAAGG AGTTGGTGTA A
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Protein sequence | MKSQISWKVG GQQGEGIEST GEIFATAMNR KGYFLYGYRH FSSRIKGGHT NNKIRVSKSP VHAISDDLDI LIAFDQETIE LNHHEMREDS IIIADSKAKP QKPENCVAQL IELPFTSTAK ELGTALMKNM VAIGATSALM DLNTSTFETL IDNMFSKKGN KVVDMNIQAL NMGYDLMKQQ VTNVNGDFTL ENGSGHPHLY MIGNDAIGLG AIAAGSRFMS AYPITPASEI MEYMIANLPK VDGTVVQTED EIAAATMAIG ANYAGVRGFT ASAGPGLSLM MESIGLSGMT ETPLVIINTQ RGGPSTGLPT KQEQSDLMQM IYGTHGDIPK IVVAPTDAED AFYLTMEAFN LAEEYQCPVI LLSDLQLSLG KQTVKTLDYN KIDIRRGEII QSDIERAEDD KAYFKRYALT ASGVSPRPIP GVKGGIHHVT GVEHNEEGKP SEAPMNRQNQ MEKRMRKTES LVINNPVLLN EHEDEADILY IGFISTKGAI GEGAERLERH GVKVNTMHIR QLHPFPKDIV QQAINKASKV IVAEHNYQGQ LSSILKMNTQ VNDKLVNQTK YDGKPFLPYE IEEKGLEIAK ELKELV
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