Gene SERP0805 details

Gene Information

• Locus tag: SERP0805
• Symbol: rimM
• ID: 3241412
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: +
• Start bp: 806687
• End bp: 807190
• Gene Length: 504 bp
• Protein Length: 167 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 637167465
• Product: 16S rRNA-processing protein RimM
• Protein accession: YP_188388
• Protein GI: 57866698
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0000000000000311839
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGTAG AGGTTGGACA AATAGTCAAT ACCCATGGTA TTAAAGGGGA AGTAAAGGTG 
AAATCCAACT CTGATTTTAC TGAAACACGA TTTCAACCTG GTGAACAATT ACTTGTAAAA 
CATAATAATA CTGAAATTGT TTATACGGTC GATTCTTATC GTATACATAA AGGGTTTCAC 
ATGTTAAGGT TTGAAGGAAT CAACAACATA AATGATATTG AACATTTGAA AGGTGATTAT 
ATTTATCAAG AACGTGATCA CCAAGATATA GAATTAGGAG AGCATGAATA TTATTATTCG 
GATATAATTG GTTGTACAGT TTTTAAAGAT GATGATACGC CAATTGGCCG GGTGATTAAT 
ATTTTTGAAA CAGGTGCTAA TGACGTTTGG ATTGTGAAAG GTGAAAAAGA GTATCTCATT 
CCTTATATTG AAGATGTTGT GAAGGATATT GATATAGAAA ATAAAACGAT TAAAATTACA 
CCGATGGAAG GATTGTTAGA TTAA 

 

Protein sequence

MEVEVGQIVN THGIKGEVKV KSNSDFTETR FQPGEQLLVK HNNTEIVYTV DSYRIHKGFH 
MLRFEGINNI NDIEHLKGDY IYQERDHQDI ELGEHEYYYS DIIGCTVFKD DDTPIGRVIN 
IFETGANDVW IVKGEKEYLI PYIEDVVKDI DIENKTIKIT PMEGLLD