| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0803 |
|---|
| Symbol | ffh |
|---|
| ID | 3241402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 804611 |
|---|
| End bp | 805978 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637167463 |
|---|
| Product | signal recognition particle protein |
|---|
| Protein accession | YP_188386 |
|---|
| Protein GI | 57866688 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0541] Signal recognition particle GTPase |
|---|
| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000079449 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTTG AAGGATTATC CGATCGCTTA CAAGCCACGA TGCAAAAAAT GCGTGGTAAA
GGGAAAGTAA CAGAAGCAGA CATTAAAACG ATGATGCGTG AAGTGAGATT AGCGTTATTG
GAAGCCGATG TTAACTTCAA AGTTGTTAAG GAATTTGTTA AGACTGTTTC AGAACGTGCG
CTAGGTTCTG ATGTCATGCA ATCTTTAACA CCTGGCCAAC AGGTTATTAA AATCGTACAA
GAAGAACTTA CTAGCTTAAT GGGTGGAGAA AATACATCCA TTAAGATGGC AAACAAACCA
CCAACTGTTG TTATGATGGT AGGCTTACAA GGTGCAGGTA AAACGACGAC AGCAGGTAAG
TTGGCATTAT TAATGCGTAA AAAATATAAC AAGAAACCTT TACTTGTGGC AGGAGATATT
TATCGTCCAG CTGCTATTGA TCAATTACAA ACAGTAGGTA AACAAATTGA TATCCCTGTG
TATAGTGAAG GTGATCAAGT ATCACCACAA CAAATTGTTG AAAATGCTTT AAAACATGCT
AAAGAAGAAC ATCTAGATTT CGTTATCATT GATACAGCTG GTCGTTTGCA TATTGATGAA
ACACTTATGA ATGAGCTTCA AGAAGTTAAA GAAATTTCTA AACCAGATGA AATTATGCTT
GTTGTTGATG CAATGACAGG TCAAGATGCT GTGAATGTGG CACAATCATT TGATGAACAA
TTAGATGTTT CAGGTGTAAC ATTGACTAAA TTAGATGGTG ATACACGTGG TGGTGCAGCA
CTTTCAATCC GTTCCGTTAC CCAAAAACCT ATTAAATTTG TAGGTATGAG TGAGAAATTG
GATGGTTTAG AATTATTCCA CCCTGAACGA ATGGCTTCGC GTATTTTAGG TATGGGTGAT
GTTTTAAGTC TCATTGAAAA AGCGCAACAA GATGTAGATC AAGAAAAGGC TAAAGATCTA
GAGAAGAAGA TGCGAGAGTC ATCATTTACA TTAGATGATT TCTTAGAACA GTTAGATCAA
GTTAAGAATT TAGGTCCTTT AGATGATATA ATGAAAATGA TTCCTGGTAT GAATAAAATG
AAAGGTTTAG ATAAGCTTAA TATGAGTGAT AAACAAATTG ATCATATTAA AGCGATTATA
CAATCTATGA CACCTAAAGA GCGTTCAAAC CCTGAAACAT TAAATGTATC GCGTAAAAAA
CGTATTGCAA AAGGATCAGG CCGATCTTTA CAAGAAGTTA ATCGACTAAT GAAACAATTT
AATGATATGA AGAAAATGAT GAAACAATTT ACTGGTGGCG GTAAAGGTAA AAAAGCTAAA
CGAAACCAAA TGCAAAATAT GTTAAAGGGT ATGAACTTAC CGTTTTAA
|
|---|
| Protein sequence | MAFEGLSDRL QATMQKMRGK GKVTEADIKT MMREVRLALL EADVNFKVVK EFVKTVSERA
LGSDVMQSLT PGQQVIKIVQ EELTSLMGGE NTSIKMANKP PTVVMMVGLQ GAGKTTTAGK
LALLMRKKYN KKPLLVAGDI YRPAAIDQLQ TVGKQIDIPV YSEGDQVSPQ QIVENALKHA
KEEHLDFVII DTAGRLHIDE TLMNELQEVK EISKPDEIML VVDAMTGQDA VNVAQSFDEQ
LDVSGVTLTK LDGDTRGGAA LSIRSVTQKP IKFVGMSEKL DGLELFHPER MASRILGMGD
VLSLIEKAQQ DVDQEKAKDL EKKMRESSFT LDDFLEQLDQ VKNLGPLDDI MKMIPGMNKM
KGLDKLNMSD KQIDHIKAII QSMTPKERSN PETLNVSRKK RIAKGSGRSL QEVNRLMKQF
NDMKKMMKQF TGGGKGKKAK RNQMQNMLKG MNLPF
|
|---|
| |