Gene SERP0706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0706 
SymbolctaB 
ID3241377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp703965 
End bp704876 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content34% 
IMG OID637167365 
Productprotoheme IX farnesyltransferase 
Protein accessionYP_188289 
Protein GI57866667 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) 
TIGRFAM ID[TIGR01473] protoheme IX farnesyltransferase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAG ATCAAACTTT GTCACATACT ACGGGCCGTG TATCCTTCAA AGAATTACAA 
CAAATTATTA AAATGGGCCT TGTTCAAGGT AATTTAATAC CTGCTTTTGC AGGCGCATGG
CTTGCAATAG TAATGACAAA CCATTCCTTC CTATCTTCCA TTCCACAAAT ACTATTGATG
CTAGTTGGCT CTACGCTTAT TATGGGGGGC GCTTGTGCTT TAAATAATTA TTATGATCAA
GATATTGATC GCATTATGCC TAGTAAGCAA AGTAGACCAA CAGTAAATGA TAGAATATCT
GATAGAAACT TATTAATGTT AAGTTTTGGG ATGATGTTAA TAGGTGAAGC ATGTTTATTC
TTATTAAATA TACCTTCTGG TGTTTTAGGA TTAATTGGTA TTGTTGGATA TGTATCTTAC
TATTCAATTT GGTCTAAGCG CCATACAACT TGGAATACTG TTGTTGGAAG TTTTCCTGGA
GCTGTACCAC CATTAATTGG TTGGGTAGCT ATCGATGGAT CATTAAGTTT AGCAGCAGTA
GCACTCTTTT TAGTTGTCTT TTGTTGGCAA CCTATCCATT TCTACGCTCT AGCAATTAAA
CGTAGTGATG AGTATGCGCT TGCAAATATT CCTATGTTAC CATCAGTGAA AGGTTTCAAA
CGGACAAGAG TAAGCATGTT TATTTGGTTA GTGTTATTAT TACCATTGCC ATTCTTATTA
TCTAATTTAG GCGTAACTTT TGTTGTTATT GCTACACTAC TTAATTTAGG ATGGTTAGCT
TTAGGTTTTA CAACGTTCAG AAAAGAATCT AATCAAACTA AATGGGCAAC GCAAATGTTC
GTTTATTCAT TGAACTACTT AGTAGTATTC TTTGCACTCG TTGTAGTTGT TTCATTAATC
AAGATGATAT AA
 
Protein sequence
MNKDQTLSHT TGRVSFKELQ QIIKMGLVQG NLIPAFAGAW LAIVMTNHSF LSSIPQILLM 
LVGSTLIMGG ACALNNYYDQ DIDRIMPSKQ SRPTVNDRIS DRNLLMLSFG MMLIGEACLF
LLNIPSGVLG LIGIVGYVSY YSIWSKRHTT WNTVVGSFPG AVPPLIGWVA IDGSLSLAAV
ALFLVVFCWQ PIHFYALAIK RSDEYALANI PMLPSVKGFK RTRVSMFIWL VLLLPLPFLL
SNLGVTFVVI ATLLNLGWLA LGFTTFRKES NQTKWATQMF VYSLNYLVVF FALVVVVSLI
KMI