Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0706 |
Symbol | ctaB |
ID | 3241377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 703965 |
End bp | 704876 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637167365 |
Product | protoheme IX farnesyltransferase |
Protein accession | YP_188289 |
Protein GI | 57866667 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAG ATCAAACTTT GTCACATACT ACGGGCCGTG TATCCTTCAA AGAATTACAA CAAATTATTA AAATGGGCCT TGTTCAAGGT AATTTAATAC CTGCTTTTGC AGGCGCATGG CTTGCAATAG TAATGACAAA CCATTCCTTC CTATCTTCCA TTCCACAAAT ACTATTGATG CTAGTTGGCT CTACGCTTAT TATGGGGGGC GCTTGTGCTT TAAATAATTA TTATGATCAA GATATTGATC GCATTATGCC TAGTAAGCAA AGTAGACCAA CAGTAAATGA TAGAATATCT GATAGAAACT TATTAATGTT AAGTTTTGGG ATGATGTTAA TAGGTGAAGC ATGTTTATTC TTATTAAATA TACCTTCTGG TGTTTTAGGA TTAATTGGTA TTGTTGGATA TGTATCTTAC TATTCAATTT GGTCTAAGCG CCATACAACT TGGAATACTG TTGTTGGAAG TTTTCCTGGA GCTGTACCAC CATTAATTGG TTGGGTAGCT ATCGATGGAT CATTAAGTTT AGCAGCAGTA GCACTCTTTT TAGTTGTCTT TTGTTGGCAA CCTATCCATT TCTACGCTCT AGCAATTAAA CGTAGTGATG AGTATGCGCT TGCAAATATT CCTATGTTAC CATCAGTGAA AGGTTTCAAA CGGACAAGAG TAAGCATGTT TATTTGGTTA GTGTTATTAT TACCATTGCC ATTCTTATTA TCTAATTTAG GCGTAACTTT TGTTGTTATT GCTACACTAC TTAATTTAGG ATGGTTAGCT TTAGGTTTTA CAACGTTCAG AAAAGAATCT AATCAAACTA AATGGGCAAC GCAAATGTTC GTTTATTCAT TGAACTACTT AGTAGTATTC TTTGCACTCG TTGTAGTTGT TTCATTAATC AAGATGATAT AA
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Protein sequence | MNKDQTLSHT TGRVSFKELQ QIIKMGLVQG NLIPAFAGAW LAIVMTNHSF LSSIPQILLM LVGSTLIMGG ACALNNYYDQ DIDRIMPSKQ SRPTVNDRIS DRNLLMLSFG MMLIGEACLF LLNIPSGVLG LIGIVGYVSY YSIWSKRHTT WNTVVGSFPG AVPPLIGWVA IDGSLSLAAV ALFLVVFCWQ PIHFYALAIK RSDEYALANI PMLPSVKGFK RTRVSMFIWL VLLLPLPFLL SNLGVTFVVI ATLLNLGWLA LGFTTFRKES NQTKWATQMF VYSLNYLVVF FALVVVVSLI KMI
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