Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0682 |
Symbol | pdhC |
ID | 3240397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 677732 |
End bp | 679033 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637167342 |
Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
Protein accession | YP_188266 |
Protein GI | 57866608 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCATTTG AATTTAGATT ACCCGATATC GGGGAAGGTA TCCACGAAGG TGAAATTGTT AAATGGTTTA TTAAAGCCGG CGATACAATT GAAGAAGATG ATGTATTAGC AGAAGTTCAA AATGATAAAT CTGTAGTAGA AATTCCTTCT CCAGTAAGTG GTACTGTTGA AGAAGTGTTA GTAGATGAAG GAACAGTGGC AGTAGTAGGA GATGTCATCG TTAAAATTGA TGCACCTGAT GCAGAAGAAA TGCAATTTAA AGGTCATGGC GATGATGAGG ATTCTAAGAA AGAAGAAAAA GAACAAGAAT CACCAGTGCA AGAAGAAGCT TCATCAACTC AATCACAAGA AAAGACAGAA GTAGATGAAA GTAAAACTGT TAAAGCGATG CCGTCAGTGC GTAAGTATGC ACGTGAAAAT GGTGTCAATA TTAAAGCTGT AAATGGTTCT GGTAAAAATG GACGAATCAC AAAAGAAGAC ATCGATGCAT ACTTAAATGG TGGTAGTTCC GAAGAAGGTT CAAACACTAG CGCAGCATCT GAATCAACTT CTAGTGATGT CGTTAATGCT TCTGCAACAC AAGCATTACC AGAAGGCGAC TTCCCTGAAA CTACAGAAAA AATACCTGCA ATGCGCAAAG CAATTGCTAA AGCAATGGTT AATTCTAAAC ACACTGCACC TCATGTTACA TTAATGGATG AAATTGATGT GCAAGAATTA TGGGATCACC GTAAGAAATT TAAAGAAATT GCTGCTGAAC AAGGTACAAA ACTTACTTTC TTACCATATG TTGTTAAAGC ATTAGTTTCT GCACTTAAAA AATATCCAGC ACTTAATACT TCTTTCAATG AAGAAGCTGG AGAGGTTGTA CACAAACATT ACTGGAATAT TGGTATTGCT GCAGATACGG ATAAAGGATT ATTAGTACCA GTAGTTAAAC ATGCCGATCG TAAATCAATA TTCGAAATTT CTGATGAAAT TAATGAACTA GCTGTAAAAG CACGTGATGG TAAATTAACT TCAGAAGAAA TGAAAGGTGC AACATGCACA ATTAGTAATA TCGGTTCCGC TGGTGGACAA TGGTTCACTC CAGTTATCAA TCACCCAGAA GTAGCTATCT TAGGAATTGG CCGTATCGCT CAAAAACCTA TCGTTAAAGA TGGAGAAATT GTAGCTGCAC CAGTGTTAGC TTTATCATTA AGCTTTGACC ATAGACAAAT CGATGGTGCT ACTGGACAAA ATGCTATGAA TCACATTAAA CGCTTATTAA ATAATCCAGA ATTATTATTA ATGGAGGGGT AA
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Protein sequence | MAFEFRLPDI GEGIHEGEIV KWFIKAGDTI EEDDVLAEVQ NDKSVVEIPS PVSGTVEEVL VDEGTVAVVG DVIVKIDAPD AEEMQFKGHG DDEDSKKEEK EQESPVQEEA SSTQSQEKTE VDESKTVKAM PSVRKYAREN GVNIKAVNGS GKNGRITKED IDAYLNGGSS EEGSNTSAAS ESTSSDVVNA SATQALPEGD FPETTEKIPA MRKAIAKAMV NSKHTAPHVT LMDEIDVQEL WDHRKKFKEI AAEQGTKLTF LPYVVKALVS ALKKYPALNT SFNEEAGEVV HKHYWNIGIA ADTDKGLLVP VVKHADRKSI FEISDEINEL AVKARDGKLT SEEMKGATCT ISNIGSAGGQ WFTPVINHPE VAILGIGRIA QKPIVKDGEI VAAPVLALSL SFDHRQIDGA TGQNAMNHIK RLLNNPELLL MEG
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