Gene SERP0682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0682 
SymbolpdhC 
ID3240397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp677732 
End bp679033 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content37% 
IMG OID637167342 
Productbranched-chain alpha-keto acid dehydrogenase subunit E2 
Protein accessionYP_188266 
Protein GI57866608 
COG category[C] Energy production and conversion 
COG ID[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCATTTG AATTTAGATT ACCCGATATC GGGGAAGGTA TCCACGAAGG TGAAATTGTT 
AAATGGTTTA TTAAAGCCGG CGATACAATT GAAGAAGATG ATGTATTAGC AGAAGTTCAA
AATGATAAAT CTGTAGTAGA AATTCCTTCT CCAGTAAGTG GTACTGTTGA AGAAGTGTTA
GTAGATGAAG GAACAGTGGC AGTAGTAGGA GATGTCATCG TTAAAATTGA TGCACCTGAT
GCAGAAGAAA TGCAATTTAA AGGTCATGGC GATGATGAGG ATTCTAAGAA AGAAGAAAAA
GAACAAGAAT CACCAGTGCA AGAAGAAGCT TCATCAACTC AATCACAAGA AAAGACAGAA
GTAGATGAAA GTAAAACTGT TAAAGCGATG CCGTCAGTGC GTAAGTATGC ACGTGAAAAT
GGTGTCAATA TTAAAGCTGT AAATGGTTCT GGTAAAAATG GACGAATCAC AAAAGAAGAC
ATCGATGCAT ACTTAAATGG TGGTAGTTCC GAAGAAGGTT CAAACACTAG CGCAGCATCT
GAATCAACTT CTAGTGATGT CGTTAATGCT TCTGCAACAC AAGCATTACC AGAAGGCGAC
TTCCCTGAAA CTACAGAAAA AATACCTGCA ATGCGCAAAG CAATTGCTAA AGCAATGGTT
AATTCTAAAC ACACTGCACC TCATGTTACA TTAATGGATG AAATTGATGT GCAAGAATTA
TGGGATCACC GTAAGAAATT TAAAGAAATT GCTGCTGAAC AAGGTACAAA ACTTACTTTC
TTACCATATG TTGTTAAAGC ATTAGTTTCT GCACTTAAAA AATATCCAGC ACTTAATACT
TCTTTCAATG AAGAAGCTGG AGAGGTTGTA CACAAACATT ACTGGAATAT TGGTATTGCT
GCAGATACGG ATAAAGGATT ATTAGTACCA GTAGTTAAAC ATGCCGATCG TAAATCAATA
TTCGAAATTT CTGATGAAAT TAATGAACTA GCTGTAAAAG CACGTGATGG TAAATTAACT
TCAGAAGAAA TGAAAGGTGC AACATGCACA ATTAGTAATA TCGGTTCCGC TGGTGGACAA
TGGTTCACTC CAGTTATCAA TCACCCAGAA GTAGCTATCT TAGGAATTGG CCGTATCGCT
CAAAAACCTA TCGTTAAAGA TGGAGAAATT GTAGCTGCAC CAGTGTTAGC TTTATCATTA
AGCTTTGACC ATAGACAAAT CGATGGTGCT ACTGGACAAA ATGCTATGAA TCACATTAAA
CGCTTATTAA ATAATCCAGA ATTATTATTA ATGGAGGGGT AA
 
Protein sequence
MAFEFRLPDI GEGIHEGEIV KWFIKAGDTI EEDDVLAEVQ NDKSVVEIPS PVSGTVEEVL 
VDEGTVAVVG DVIVKIDAPD AEEMQFKGHG DDEDSKKEEK EQESPVQEEA SSTQSQEKTE
VDESKTVKAM PSVRKYAREN GVNIKAVNGS GKNGRITKED IDAYLNGGSS EEGSNTSAAS
ESTSSDVVNA SATQALPEGD FPETTEKIPA MRKAIAKAMV NSKHTAPHVT LMDEIDVQEL
WDHRKKFKEI AAEQGTKLTF LPYVVKALVS ALKKYPALNT SFNEEAGEVV HKHYWNIGIA
ADTDKGLLVP VVKHADRKSI FEISDEINEL AVKARDGKLT SEEMKGATCT ISNIGSAGGQ
WFTPVINHPE VAILGIGRIA QKPIVKDGEI VAAPVLALSL SFDHRQIDGA TGQNAMNHIK
RLLNNPELLL MEG