Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0498 |
Symbol | sufS |
ID | 3240557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 487782 |
End bp | 489023 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637167164 |
Product | cysteine desulfurase SufS |
Protein accession | YP_188090 |
Protein GI | 57866419 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGAAC ATTCTTTTGA TGTCAAGGCA GTCATTAAAG ACTTTCCGAT ACTTGAGCAA AAGGTAAATA ATAAACGTTT AGCATACCTT GATTCAACTG CGACTAGCCA AACACCTGTA CAAGTTTTAA ATGTACTAGA TGATTACTAC AAACGCTATA ATTCTAATGT CCATCGTGGT GTACACACAT TAGGGTCTTT AGCTACAGAT GGCTATGAAA ATGCAAGAGA AACAGTAAGA CGTTTTATCA ATGCGAAGTA CTTTGAAGAA ATTATTTTCA CTCGAGGAAC AACTGCATCA ATAAATATAG TAGCACATAG TTATGGTGAC GCTAATATTA GTGAGGGTGA CGAAATTGTT GTAACAGAAA TGGAACATCA TGCTAATATT GTTCCATGGC AACAATTAGC TAAACGTAAA AATGCAACAC TAAAATTTAT TCCAATGACA AAAGATGGTG AATTGCAATT AGATGATATA AAAGCAACCA TCAATGATAA AACTAAAATT GTTGCTATCG CACACGTTTC CAATGTTTTA GGAACAATTA ATGATGTTAA AACTATCGCT AAAATTGCAC ATGAACATGG TGCAGTTATA AGTGTGGATG GTGCGCAATC AGCTCCACAC ATGGCTTTAG ATATGCAAGA TATCGATGCT GATTTTTATA GTTTTAGTGG ACATAAAATG TTAGGTCCTA CTGGCATTGG AGTTTTATAT GGAAAAAGAG AATTATTACA AAATATGGAA CCCGTTGAAT TTGGTGGAGA TATGATAGAC TTCGTAAGTA AATATGACGC CACTTGGGCT GACCTACCAA CTAAATTTGA GGCTGGCACA CCACTTATTG CTCAAGCAAT AGGTTTAGCA GAAGCTATAC ATTATATTGA AAATTTAGGT TTTAATGCGA TTCATCAGCA TGAAAAAGAA TTGACAGAAT ATGCATATGA ACAAATGTTA ACTATAGATG GTCTTGAAAT TTACGGTCCA CCAAAAGATA GACGTGCAGG GGTCATTACT TTTAATTTAG CAGATATACA TCCACATGAT GTAGCTACAG CTGTTGATAC AGAAGGTGTT GCAGTTCGTG CAGGCCATCA CTGTGCGCAA CCTTTGATGA AATGGTTAGG TGTCTCTTCA ACAGCACGTG CAAGTTTTTA CGTTTATAAT ACGAAAGAAG ATGTAGATCA ATTAGTTCAA GCATTGAAAC AAACGAAGGA GTTTTTCTCT TATGAATTTT AA
|
Protein sequence | MAEHSFDVKA VIKDFPILEQ KVNNKRLAYL DSTATSQTPV QVLNVLDDYY KRYNSNVHRG VHTLGSLATD GYENARETVR RFINAKYFEE IIFTRGTTAS INIVAHSYGD ANISEGDEIV VTEMEHHANI VPWQQLAKRK NATLKFIPMT KDGELQLDDI KATINDKTKI VAIAHVSNVL GTINDVKTIA KIAHEHGAVI SVDGAQSAPH MALDMQDIDA DFYSFSGHKM LGPTGIGVLY GKRELLQNME PVEFGGDMID FVSKYDATWA DLPTKFEAGT PLIAQAIGLA EAIHYIENLG FNAIHQHEKE LTEYAYEQML TIDGLEIYGP PKDRRAGVIT FNLADIHPHD VATAVDTEGV AVRAGHHCAQ PLMKWLGVSS TARASFYVYN TKEDVDQLVQ ALKQTKEFFS YEF
|
| |