Gene SERP0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0398 
SymbolnrdF 
ID3241169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp400714 
End bp401682 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content31% 
IMG OID637167064 
Productribonucleotide-diphosphate reductase subunit beta 
Protein accessionYP_187991 
Protein GI57866341 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0208] Ribonucleotide reductase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.804906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCGG TAAATTGGAA CACCCAAGAA GATATGACTA ATATGTTCTG GCGTCAAAAT 
ATCTCACAAA TGTGGGTGGA AACAGAATTT AAAGTATCAA AAGATATAGC AAGTTGGAAA
ACATTAACAG ATTCTGAGAA AAATACTTTT AAAAAAGCGC TTGCAGGTTT AACAGGTTTA
GATACACATC AAGCTGATGA TGGTATGCCA TTAATCATGC TTCATACTAC TGATTTAAGA
AAGAAAGCTG TTTATTCATT TATGGCTATG ATGGAACAAA TCCATGCGAA AAGTTATTCT
CATATCTTCA CTACATTATT ACCATCTAGT GAAACCAACT ATTTATTGGA TACTTGGGTT
ATTGAAGAGC CACATTTAAA ATATAAATCA GATAAAATTG TAGAAAATTA CCACAAACTT
TGGGGTAAAG AAGCATCGAT TTACGATCAA TATATTGCTC GTGTTTCTAG TGTATTCTTA
GAAACATTTC TATTCTATTC TGGCTTCTAT TATCCATTAT ATCTCGCAGG ACAAGGAAAA
ATGACTACGT CAGGTGAAAT TATACGTAAG ATACTTTTAG ATGAATCTAT ACATGGAGTG
TTCACAGGTT TAGATGCACA AAGTCTACGT AATGAGTTAT CTGAAAGTGA GAAACAAAAA
GCTGATCAAG AAATGTACAA ATTATTAAAT GAACTTTATG ATAATGAAGT TTCATATACA
CATTTATTAT ATGATGATAT TGGTCTTGCT GAAGATGTAT TAAATTATGT TCGATATAAT
GGAAATAAAG CATTATCGAA TTTAGGTTTT GAACCATATT TCGAAGAGAG AGAGTTTAAC
CCTATTATTG AAAATGCACT AGATACATCT ACAAAGAACC ACGATTTCTT CTCTGTTAAA
GGTGATGGCT ATACATTGGC TTTAAATGTT GAGCCTCTAC GTGATGAAGA CTTTGTTTTT
GATAATTAA
 
Protein sequence
MKAVNWNTQE DMTNMFWRQN ISQMWVETEF KVSKDIASWK TLTDSEKNTF KKALAGLTGL 
DTHQADDGMP LIMLHTTDLR KKAVYSFMAM MEQIHAKSYS HIFTTLLPSS ETNYLLDTWV
IEEPHLKYKS DKIVENYHKL WGKEASIYDQ YIARVSSVFL ETFLFYSGFY YPLYLAGQGK
MTTSGEIIRK ILLDESIHGV FTGLDAQSLR NELSESEKQK ADQEMYKLLN ELYDNEVSYT
HLLYDDIGLA EDVLNYVRYN GNKALSNLGF EPYFEEREFN PIIENALDTS TKNHDFFSVK
GDGYTLALNV EPLRDEDFVF DN