Gene SERP0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0392 
Symbol 
ID3241326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp394195 
End bp395700 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content34% 
IMG OID637167058 
Productdi-tripeptide transporter, putative 
Protein accessionYP_187985 
Protein GI57866326 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3104] Dipeptide/tripeptide permease 
TIGRFAM ID[TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCAA ATAAGTCCCA TGAAAAAGCA GTTCAAGAAA TACCACAACA TGGATTCTTC 
GGGCATCCAA AAGGATTAGG CGTTCTCTTT TTCGTAGAAT TTTGGGAGAG ATTCAGCTAT
TACGGAATGA GAGCAATGCT TATTTTTTAT ATGTATTTTG CACTCCAGGA AAACGGACTT
GGAATGGACA AAACAACAGC CATGTCTATC ATGTCTGTAT ATGGATCATT AATTTATATG
TCTTCAATTC CAGGTGGCTG GATAGCTGAT AGAATTACAG GTACCCGAGG TGCCACATTA
ATCGGAGCTA TATTAATTAT TATAGGTCAC ATATGTTTAA GCCTTCCTTT TGCAATGGTA
GGTTTATTCA CTTCTATGTT CTTTATTATT GTAGGATCAG GTTTAATGAA ACCAAACATT
TCAAATATTG TTGGTAGACT CTATCCAGAA AACGACGTAC GCATGGATGC TGGATTTGTT
ATCTTCTATA TGTCAGTGAA CATGGGTGCA CTCGTTTCAC CAATTATTTT ACAACACTAT
ATTGATATTA GAAATTTCCA TGGCGGCTTC TTGATTGCAG CAATAGGGAT GGCTCTTGGA
TTAGTTTGGT ACTTACTATT TAACCGAAAA ACTTTGGGTA GTATCGGTAT GAAACCGACA
AACCCATTAT CTTCTTCTGA AAAGAAAAAG TACGGAACAA TCATCGGAAT CGTTGTTATA
GCAATAGTAT TAATCCTTAT GATTGCTTAC TTTACGCATA CGCTATCATT TAATTTAATC
AGTAATACTG TTTTAATTTT AGGTATTGCT TTACCAATCA TTTACTTTAC AACAATGATT
AGAAGTAAAG AAGTTACTGA TACTGAAAGA TCAAGAGTAA AAGCATTTAT TCCGTTATTC
ATTTTAGGCA TGTTATTTTG GTCAATTCAA GAACAAGGAT CTAATGTATT AAATATCTAT
GGTATTGAAA ACTCTGATAT GAAATTAAAT TTATTTGGTT GGAAAACACA TTTTGGTGAA
GCTATTTTCC AAACCATTAA CCCATTATTT ATTTTATTAT TTGCACCCGT GGTTACTCTT
TTATGGCAAA AGCTAGGAAA GAAACAACCT AGCCTACCTA TTAAGTTTGC AATTGGTACT
ATTTTAGCAG GCGCATCCTA CATACTTATG GGAGCAATCG GTCATATTTA TGGGGATACA
CAATTCTCAG TTAACTGGGT TATTCTTTCA TACGTTATCT GTGTTATTGG TGAGCTTTGT
CTCTCTCCAA CTGGTAGTAG TGCAGCAGTT AAATTAGCAC CTAAGGCATT TAACGCACAA
ATGATGAGCC TTTGGTTATT AACTAACGCT TCAGCTCAGG CCATTAACGG TACATTAGTT
AAATTAATTA AACCACTTGG TCAAACCAAT TACTTTATCT TCTTAGGTGT TGTTGCAACC
GTGATTACGT TAATTATATT AGCGTTTATT CCTAAGATTT CTAAAGCAAT GAAAGGTATT
CGTTAA
 
Protein sequence
MTSNKSHEKA VQEIPQHGFF GHPKGLGVLF FVEFWERFSY YGMRAMLIFY MYFALQENGL 
GMDKTTAMSI MSVYGSLIYM SSIPGGWIAD RITGTRGATL IGAILIIIGH ICLSLPFAMV
GLFTSMFFII VGSGLMKPNI SNIVGRLYPE NDVRMDAGFV IFYMSVNMGA LVSPIILQHY
IDIRNFHGGF LIAAIGMALG LVWYLLFNRK TLGSIGMKPT NPLSSSEKKK YGTIIGIVVI
AIVLILMIAY FTHTLSFNLI SNTVLILGIA LPIIYFTTMI RSKEVTDTER SRVKAFIPLF
ILGMLFWSIQ EQGSNVLNIY GIENSDMKLN LFGWKTHFGE AIFQTINPLF ILLFAPVVTL
LWQKLGKKQP SLPIKFAIGT ILAGASYILM GAIGHIYGDT QFSVNWVILS YVICVIGELC
LSPTGSSAAV KLAPKAFNAQ MMSLWLLTNA SAQAINGTLV KLIKPLGQTN YFIFLGVVAT
VITLIILAFI PKISKAMKGI R