Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0392 |
Symbol | |
ID | 3241326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 394195 |
End bp | 395700 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637167058 |
Product | di-tripeptide transporter, putative |
Protein accession | YP_187985 |
Protein GI | 57866326 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3104] Dipeptide/tripeptide permease |
TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTCAA ATAAGTCCCA TGAAAAAGCA GTTCAAGAAA TACCACAACA TGGATTCTTC GGGCATCCAA AAGGATTAGG CGTTCTCTTT TTCGTAGAAT TTTGGGAGAG ATTCAGCTAT TACGGAATGA GAGCAATGCT TATTTTTTAT ATGTATTTTG CACTCCAGGA AAACGGACTT GGAATGGACA AAACAACAGC CATGTCTATC ATGTCTGTAT ATGGATCATT AATTTATATG TCTTCAATTC CAGGTGGCTG GATAGCTGAT AGAATTACAG GTACCCGAGG TGCCACATTA ATCGGAGCTA TATTAATTAT TATAGGTCAC ATATGTTTAA GCCTTCCTTT TGCAATGGTA GGTTTATTCA CTTCTATGTT CTTTATTATT GTAGGATCAG GTTTAATGAA ACCAAACATT TCAAATATTG TTGGTAGACT CTATCCAGAA AACGACGTAC GCATGGATGC TGGATTTGTT ATCTTCTATA TGTCAGTGAA CATGGGTGCA CTCGTTTCAC CAATTATTTT ACAACACTAT ATTGATATTA GAAATTTCCA TGGCGGCTTC TTGATTGCAG CAATAGGGAT GGCTCTTGGA TTAGTTTGGT ACTTACTATT TAACCGAAAA ACTTTGGGTA GTATCGGTAT GAAACCGACA AACCCATTAT CTTCTTCTGA AAAGAAAAAG TACGGAACAA TCATCGGAAT CGTTGTTATA GCAATAGTAT TAATCCTTAT GATTGCTTAC TTTACGCATA CGCTATCATT TAATTTAATC AGTAATACTG TTTTAATTTT AGGTATTGCT TTACCAATCA TTTACTTTAC AACAATGATT AGAAGTAAAG AAGTTACTGA TACTGAAAGA TCAAGAGTAA AAGCATTTAT TCCGTTATTC ATTTTAGGCA TGTTATTTTG GTCAATTCAA GAACAAGGAT CTAATGTATT AAATATCTAT GGTATTGAAA ACTCTGATAT GAAATTAAAT TTATTTGGTT GGAAAACACA TTTTGGTGAA GCTATTTTCC AAACCATTAA CCCATTATTT ATTTTATTAT TTGCACCCGT GGTTACTCTT TTATGGCAAA AGCTAGGAAA GAAACAACCT AGCCTACCTA TTAAGTTTGC AATTGGTACT ATTTTAGCAG GCGCATCCTA CATACTTATG GGAGCAATCG GTCATATTTA TGGGGATACA CAATTCTCAG TTAACTGGGT TATTCTTTCA TACGTTATCT GTGTTATTGG TGAGCTTTGT CTCTCTCCAA CTGGTAGTAG TGCAGCAGTT AAATTAGCAC CTAAGGCATT TAACGCACAA ATGATGAGCC TTTGGTTATT AACTAACGCT TCAGCTCAGG CCATTAACGG TACATTAGTT AAATTAATTA AACCACTTGG TCAAACCAAT TACTTTATCT TCTTAGGTGT TGTTGCAACC GTGATTACGT TAATTATATT AGCGTTTATT CCTAAGATTT CTAAAGCAAT GAAAGGTATT CGTTAA
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Protein sequence | MTSNKSHEKA VQEIPQHGFF GHPKGLGVLF FVEFWERFSY YGMRAMLIFY MYFALQENGL GMDKTTAMSI MSVYGSLIYM SSIPGGWIAD RITGTRGATL IGAILIIIGH ICLSLPFAMV GLFTSMFFII VGSGLMKPNI SNIVGRLYPE NDVRMDAGFV IFYMSVNMGA LVSPIILQHY IDIRNFHGGF LIAAIGMALG LVWYLLFNRK TLGSIGMKPT NPLSSSEKKK YGTIIGIVVI AIVLILMIAY FTHTLSFNLI SNTVLILGIA LPIIYFTTMI RSKEVTDTER SRVKAFIPLF ILGMLFWSIQ EQGSNVLNIY GIENSDMKLN LFGWKTHFGE AIFQTINPLF ILLFAPVVTL LWQKLGKKQP SLPIKFAIGT ILAGASYILM GAIGHIYGDT QFSVNWVILS YVICVIGELC LSPTGSSAAV KLAPKAFNAQ MMSLWLLTNA SAQAINGTLV KLIKPLGQTN YFIFLGVVAT VITLIILAFI PKISKAMKGI R
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