Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0384 |
Symbol | recQ-1 |
ID | 3241747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 383163 |
End bp | 384941 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637167051 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_187978 |
Protein GI | 57866319 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family [TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGAGA CTTTATCGCA TTATTTTGGT TATAAGTCAT TTCGACCAGG ACAAGAAGAA ATTATAACTA AAATATTAAA TCATCAGCAT ACACTGGGGG TACTACCTAC CGGTGGCGGT AAATCGATAT GCTATCAAGT ACCAGGTTTA ATGCAGGGTG GCACAACTAT TGTTATAAGT CCACTTATTT CTTTGATGAA AGACCAAGTT GATCAACTAC AAGCAATGGG AATTCAAGCT GCATATTTGA ATAGTAGTTT GACTCATAAA CAACAAAAAG AGATTGAAGA GCAAATAAAG CGTGGTGCCA TTCAGTTTTT ATATGTAGCT CCAGAGCGCT TTGAAAATAC TTTTTTTCTA AATTTATTAC GTAAAATAGA AATACCCCTT ATCGCTTTTG ATGAAGCACA CTGTATATCG AAGTGGGGAC ATGATTTTAG ACCTAGTTAC CAAAGTGTCA TACAAAAAGT TTTTACCTTA CCTCAAAACT TCACAATAGT TGCACTTACA GCTACGGCAA CTGCTGAAGT TCAACAAGAT ATCATGTCTA AGTTATCAAT TGGACAAAAT GATGTTGTCA AAACAAGTAC TAAAAGACGC AATTTAATCT TCAAAGTCAA TCCGACTTAT CAGCGACAAA AATTTGTTGT GGATTATGTT GCAAATCATG AAGGACAGGC AGGAATCATT TATTGTTCCA CTCGTAAGCA GGTAGAAGAA TTACACGAAG CTCTAAATAG TGAAAAAATT AAGAGCACAA TTTATCATGC TGGTTTAACG AATAAAGAGA GAATTGAGGC GCAAAATGAT TTCTTGTATG ATCGTGTAGA GGTTGTCATT GCGACAAATG CATTTGGTAT GGGTATTGAT AAATCAAATG TACGTTATGT CATTCACTAT AACATGCCTG GAGATTTGGA ATCTTACTAT CAGGAAGCTG GACGCGCGGG ACGTGATGGT TTAAAAAGTG AGTGTATCCT TTTGTTTAGT GAACGAGATA AGGGATTACA TGAGTATTTT ATTACTGTAT CCCAAGCTGA TGATGACTAT AAAGATAAAA TGGGCGAAAA ATTAACGAAA ATGATTCAAT ATACCAAAAC GAAAAAGTGT TTAGAAGCGA CAATTGTTCA TTATTTTGAA CCCAATGAAA ATTTAGAGGA ATGCAATCAA TGTAGTAATT GTATACAGGA AAATAAAACG TATGATATGA CTCGTGAAGC GAAAATGATT ATTAGCTGTA TTGCTCGAAT GAAGCAACAG GAAAATTATA GTGTTATTAT ACAAGTTTTA CGTGGAGAAG TGACAGATTA TATAAAACAC CATCATTATA ATGAATTAAC GACACATGGG TTGATGAAAA ATTATACAAC ATCTGAGTTA TCACACTTAA TTGATGAGCT ACGTTTCAAA GGATATTTAA ATGAAAATGA TGAAATTCTT ATGTGTGATA CATCAGTGAA ACAATTACTA AATAATCATA CCAAGGTTTA TACCACTCCG TTCAAACAAA AAACTAAAGA GAAGGTATTT ATCAACACTG TTGAAGGTGT GGATAGAGCG TTATATCGTG AGCTTGTTGA TGTACGTAAA CAGCTAAGTG ATAAACTTGG AATAGCACCT GTAAGTATAT TTTCTGATTA CACGCTCGAA GAATTTGCTA AGCGTAAACC TGAATCGAAA CAAGAAATGA TTGCTATTGA TGGTGTAGGT AGTTATAAAT TAAAGCATTA TTGTCCTAAG TTTATCGAAA CCATACAAAG CTATAAAACT AGAATATAA
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Protein sequence | MQETLSHYFG YKSFRPGQEE IITKILNHQH TLGVLPTGGG KSICYQVPGL MQGGTTIVIS PLISLMKDQV DQLQAMGIQA AYLNSSLTHK QQKEIEEQIK RGAIQFLYVA PERFENTFFL NLLRKIEIPL IAFDEAHCIS KWGHDFRPSY QSVIQKVFTL PQNFTIVALT ATATAEVQQD IMSKLSIGQN DVVKTSTKRR NLIFKVNPTY QRQKFVVDYV ANHEGQAGII YCSTRKQVEE LHEALNSEKI KSTIYHAGLT NKERIEAQND FLYDRVEVVI ATNAFGMGID KSNVRYVIHY NMPGDLESYY QEAGRAGRDG LKSECILLFS ERDKGLHEYF ITVSQADDDY KDKMGEKLTK MIQYTKTKKC LEATIVHYFE PNENLEECNQ CSNCIQENKT YDMTREAKMI ISCIARMKQQ ENYSVIIQVL RGEVTDYIKH HHYNELTTHG LMKNYTTSEL SHLIDELRFK GYLNENDEIL MCDTSVKQLL NNHTKVYTTP FKQKTKEKVF INTVEGVDRA LYRELVDVRK QLSDKLGIAP VSIFSDYTLE EFAKRKPESK QEMIAIDGVG SYKLKHYCPK FIETIQSYKT RI
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