Gene SERP0359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0359 
SymbolfruA 
ID3241739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp356937 
End bp358889 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content37% 
IMG OID637167028 
ProductPTS system, fructose-specific IIABC components 
Protein accessionYP_187955 
Protein GI57866311 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1299] Phosphotransferase system, fructose-specific IIC component
[COG1445] Phosphotransferase system fructose-specific component IIB
[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID[TIGR00829] PTS system, fructose-specific, IIB component
[TIGR00848] PTS system, fructose subfamily, IIA component
[TIGR01427] PTS system, fructose subfamily, IIC component 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATTA CTGAACTGTT AACTAAAGAA ACAATAGCGA TGGATTTAGA TGCTTCTGAT 
AAAAGTGGGG TGATTACTGA GCTTGTTAAT CAATTGGATA AAGCAGGTAA GTTAAGTGAC
CCTGTATCGT TTAAAGAGGC AATTCATAAT CGTGAATCTC AGAGCACAAC AGGAATTGGT
GAAGGTATTG CTATACCACA TGCTAAAGTT GCAGCAGTTA AAACACCTGC AATTGCATTC
GGTAAATCTA AAGAAGGTGT GGATTATCAA AGTTTAGACA TGCAACCTGC ACACTTATTC
TTTATGATTG CAGCGCCTGA AGGTGGAGCA CAAACGCATT TAGATGCGCT TGCGAAACTT
TCTGGAATAT TAATGGATGA GAAAATACGT GAAAAATTAA TTCATGCTGA ATCTCCTGAA
GAAGTGTTAA ACATTATCGA TGAAGCGGAT GATGAGGCAA CAAAAGAAGA AGAAGCAGAA
GCGAACGAAA ATGCAACTGT TTCAACTGAC AACTCAAATC AAGATAATAA TGAGCCATAT
GTTTTAGCTG TTACAGCATG CCCAACTGGG ATTGCCCACA CATATATGGC ACGTGATGCT
TTGAAAAAGC AAGCTGAGAA GATGAACATC AAAATTAAAG TTGAAACAAA TGGTTCTAGT
GGTATTAAAA ACCATTTAAC TGAACAAGAT ATAGAACGTG CAACTGGAAT AATTGTTGCA
GCAGATGTCC ATGTAGAAAC TGATCGTTTT GATGGGAAAA ATGTGGTTGA GGTTCCTGTT
GCTGATGGTA TTAAGCGTCC CGAGGAACTA ATTAATACAG CTTTAGATAC AAATCGTAAA
CCATTTGTAG CGCAAGGTGG ATCTAAAAAA CATGACGATA ATGAAGAAAA GTTAAGTCCA
GGAAAAGCAT TCTATAAACA CTTAATGAAT GGTGTTTCTA ATATGTTACC ACTTGTTATT
TCGGGTGGTA TCTTAATGGC AATTGTATTC TTATTCGGCG CAAACTCATT TAAGCCTGAT
AGTTCAGAAT ATAATGCATT TGCCGAACAA TTATGGAATA TTGGTAAAAA TAGTGCCTTT
GCTTTAATTA TTCCAATTTT AGCTGGTTTC ATTGCACGTA GTATTGCAGA TAAACCAGGT
TTTGCAGCTG GTTTAGTTGG TGGTATGTTA GCTATTTCTG GAGGTTCTGG CTTTATTGGT
GGAATTATTG CTGGTTTCTT AGCAGGTTAT TTAACTCAAG GAATTAAATA TATTACACGT
AAATTGCCAC AAGCAATTGA AGGCTTGAAA CCTACTTTAA TCTATCCATT ACTTTCAGTT
TCAATTACTG GATTGTTAAT GGTGTATGTC TTTAATCCGC CAGCAGCTTG GTTAAATCAT
TTGCTACTAA ATGGTTTAAA TAGTCTGTCA GGCTCTAATA TTATGTTACT TGGTCTTGTG
ATTGGAGCTA TGATGGCAAT TGACATGGGC GGTCCATTTA ATAAAGCAGC TTATGTATTT
GCTACTGCTG CATTAACGGA AGGAAATGCA GCTCCTATTA CTGCAGCGAT GATTGGTGGT
ATGATTCCTC CATTAGCTAT CGCTACAGCA ATGTTAATCT TTAGAAGAAA ATTCACTAAA
GAGCAAAGAG GCTCAATTGT ACCAAACTAT GTCATGGGAT TATCATTTAT TACTGAAGGT
GCCATCCCAT TCGCAGCTGC CGATCCATTA CGTGTGATTC CTTCAATGAT GGTTGGCTCA
GGTGTGGCTG GAGCAATTGC TTTAGGTTTA GGATCAAGTA TCAAAGCACC TCATGGTGGA
ATTTTCGTCA TTATTGGTAC TGATTTTAAC CATATACTTC AAACTCTTAT TGCTTTAGTT
GTGGGTACGT TAGTTTCAGC TTTAATTTAT GGTTTCTTGA AACCAAAAGT AACAGAAAAT
GAAATTCAAG CATCTCAAGC TATGGATGAA TAG
 
Protein sequence
MRITELLTKE TIAMDLDASD KSGVITELVN QLDKAGKLSD PVSFKEAIHN RESQSTTGIG 
EGIAIPHAKV AAVKTPAIAF GKSKEGVDYQ SLDMQPAHLF FMIAAPEGGA QTHLDALAKL
SGILMDEKIR EKLIHAESPE EVLNIIDEAD DEATKEEEAE ANENATVSTD NSNQDNNEPY
VLAVTACPTG IAHTYMARDA LKKQAEKMNI KIKVETNGSS GIKNHLTEQD IERATGIIVA
ADVHVETDRF DGKNVVEVPV ADGIKRPEEL INTALDTNRK PFVAQGGSKK HDDNEEKLSP
GKAFYKHLMN GVSNMLPLVI SGGILMAIVF LFGANSFKPD SSEYNAFAEQ LWNIGKNSAF
ALIIPILAGF IARSIADKPG FAAGLVGGML AISGGSGFIG GIIAGFLAGY LTQGIKYITR
KLPQAIEGLK PTLIYPLLSV SITGLLMVYV FNPPAAWLNH LLLNGLNSLS GSNIMLLGLV
IGAMMAIDMG GPFNKAAYVF ATAALTEGNA APITAAMIGG MIPPLAIATA MLIFRRKFTK
EQRGSIVPNY VMGLSFITEG AIPFAAADPL RVIPSMMVGS GVAGAIALGL GSSIKAPHGG
IFVIIGTDFN HILQTLIALV VGTLVSALIY GFLKPKVTEN EIQASQAMDE