| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0207 |
|---|
| Symbol | |
|---|
| ID | 3242987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 216458 |
|---|
| End bp | 219136 |
|---|
| Gene Length | 2679 bp |
|---|
| Protein Length | 892 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637166876 |
|---|
| Product | sdrG protein |
|---|
| Protein accession | YP_187803 |
|---|
| Protein GI | 57866125 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4932] Predicted outer membrane protein |
|---|
| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTTGGTT TAGGTCATAA TGAGGCCAAA GCTGAGGAGA ATACAGTACA AGACGTTAAA
GATTCGAATA TGGATGATGA ATTATCAGAT AGCAATGATC AGTCCAGTAA TGAAGAAAAG
AATGATGTAA TCAATAATAG TCAGTCAATA AACACCGATG ATGATAACCA AATAAAAAAA
GAAGAAACGA ATAGCAACGA TGCCATAGAA AATCGCTCTA AAGATATAAC ACAGTCAACA
ACAAATGTAG ATGAAAACGA AGCAACATTT TTACAAAAGA CCCCTCAAGA TAATACTCAG
CTTAAAGAAG AAGTGGTAAA AGAACCCTCA TCAGTCGAAT CCTCAAATTC ATCAATGGAT
ACTGCCCAAC AACCATCTCA TACAACAATA AATAGTGAAG CATCTATTCA AACAAGTGAT
AATGAAGAAA ATTCCCGCGT ATCAGATTTT GCTAACTCTA AAATAATAGA GAGTAACACT
GAATCCAATA AAGAAGAGAA TACTATAGAG CAACCTAACA AAGTAAGAGA AGATTCAATA
ACAAGTCAAC CGTCTAGCTA TAAAAATATA GATGAAAAAA TTTCAAATCA AGATGAGTTA
TTAAATTTAC CAATAAATGA ATATGAAAAT AAGGTTAGAC CGTTATCTAC AACATCTGCC
CAACCATCGA GTAAGCGTGT AACCGTAAAT CAATTAGCGG CAGAACAAGG TTCGAATGTT
AATCATTTAA TTAAAGTTAC TGATCAAAGT ATTACTGAAG GATATGATGA TAGTGATGGT
ATTATTAAAG CACATGATGC TGAAAACTTA ATCTATGATG TAACTTTTGA AGTAGATGAT
AAGGTGAAAT CTGGTGATAC GATGACAGTG AATATAGATA AGAATACAGT TCCATCAGAT
TTAACCGATA GTTTTGCAAT ACCAAAAATA AAAGATAATT CTGGAGAAAT CATCGCTACA
GGTACTTATG ACAACACAAA TAAACAAATT ACCTACACTT TTACAGATTA TGTAGATAAA
TATGAAAATA TTAAAGCGCA CCTTAAATTA ACATCATACA TTGATAAATC AAAGGTTCCA
AATAATAACA CTAAGTTAGA TGTAGAATAT AAGACGGCCC TTTCATCAGT AAATAAAACA
ATTACGGTTG AATATCAAAA ACCTAACGAA AATCGGACTG CTAACCTTCA AAGTATGTTC
ACAAACATAG ATACGAAAAA CCATACAGTT GAGCAAACGA TTTATATTAA CCCTCTTCGT
TATTCAGCCA AAGAAACAAA TGTAAATATT TCAGGGAATG GCGATGAAGG TTCAACAATT
ATCGACGATA GTACAATCAT TAAAGTTTAT AAGGTTGGAG ATAATCAAAA TTTACCAGAT
AGTAACAGAA TTTATGATTA CAGTGAATAT GAAGATGTCA CAAATGATGA TTATGCCCAA
TTAGGAAATA ATAATGACGT GAATATTAAT TTTGGTAATA TAGATTCACC ATATATTATT
AAAGTTATTA GTAAATATGA CCCTAATAAG GACGATTACA CGACGATACA GCAAACTGTG
ACAATGCAAA CGACTATAAA TGAGTATACT GGTGAGTTTA GAACAGCATC CTATGATAAT
ACAATTGCTT TCTCTACAAG TTCAGGTCAA GGACAAGGTG ACTTGCCTCC TGAAAAAACT
TATAAAATCG GAGATTACGT ATGGGAAGAT GTAGATAAAG ATGGTATTCA AAATACAAAT
GATAATGAAA AACCGCTTAG TAATGTATTG GTAACTTTGA CGTATCCTGA TGGAACTTCA
AAATCAGTCA GAACAGATGA AGAGGGGAAA TATCAATTTG ATGGGTTAAA AAACGGATTG
ACTTATAAAA TTACATTCGA AACACCGGAA GGATATACGC CGACGCTTAA ACATTCAGGA
ACAAATCCTG CACTAGACTC AGAAGGCAAT TCTGTATGGG TAACTATTAA CGGACAAGAC
GATATGACTA TTGATAGCGG ATTTTATCAA ACACCTAAAT ATAGCTTAGG GAACTATGTA
TGGTATGACA CTAATAAAGA TGGTATTCAA GGTGATGATG AAAAAGGAAT CTCTGGAGTA
AAAGTGACGT TAAAAGATGA AAACGGAAAT ATCATTAGTA CAACAACAAC TGATGAAAAT
GGAAAGTATC AATTTGATAA TTTAAATAGT GGTAATTATA TTGTTCATTT TGATAAACCT
TCAGGTATGA CTCAAACAAC AACAGATTCT GGTGATGATG ACGAACAGGA TGCTGATGGG
GAAGAAGTCC ATGTAACAAT TACTGATCAT GATGACTTTA GTATAGATAA CGGATACTAT
GATGACGACT CAGATTCAGA TAGTGATTCA GACTCAGATA GCGACGACTC AGACTCCGAT
AGCGATTCCG ACTCAGACAG CGACTCAGAT TCCGATAGTG ATTCAGATTC AGACAGTGAC
TCAGACTCAG ATAGTGATTC AGATTCAGAC AGCGATTCCG ACTCAGACAG TGACTCAGGA
TTAGACAATA GCTCAGATAA GAATACAAAA GATAAATTAC CGGATACAGG AGCTAATGAA
GATCATGATT CTAAAGGCAC ATTACTTGGA GCTTTATTTG CAGGTTTAGG AGCGTTATTA
TTAGGGAAGC GTCGCAAAAA TAGAAAAAAT AAAAATTAA
|
|---|
| Protein sequence | MFGLGHNEAK AEENTVQDVK DSNMDDELSD SNDQSSNEEK NDVINNSQSI NTDDDNQIKK
EETNSNDAIE NRSKDITQST TNVDENEATF LQKTPQDNTQ LKEEVVKEPS SVESSNSSMD
TAQQPSHTTI NSEASIQTSD NEENSRVSDF ANSKIIESNT ESNKEENTIE QPNKVREDSI
TSQPSSYKNI DEKISNQDEL LNLPINEYEN KVRPLSTTSA QPSSKRVTVN QLAAEQGSNV
NHLIKVTDQS ITEGYDDSDG IIKAHDAENL IYDVTFEVDD KVKSGDTMTV NIDKNTVPSD
LTDSFAIPKI KDNSGEIIAT GTYDNTNKQI TYTFTDYVDK YENIKAHLKL TSYIDKSKVP
NNNTKLDVEY KTALSSVNKT ITVEYQKPNE NRTANLQSMF TNIDTKNHTV EQTIYINPLR
YSAKETNVNI SGNGDEGSTI IDDSTIIKVY KVGDNQNLPD SNRIYDYSEY EDVTNDDYAQ
LGNNNDVNIN FGNIDSPYII KVISKYDPNK DDYTTIQQTV TMQTTINEYT GEFRTASYDN
TIAFSTSSGQ GQGDLPPEKT YKIGDYVWED VDKDGIQNTN DNEKPLSNVL VTLTYPDGTS
KSVRTDEEGK YQFDGLKNGL TYKITFETPE GYTPTLKHSG TNPALDSEGN SVWVTINGQD
DMTIDSGFYQ TPKYSLGNYV WYDTNKDGIQ GDDEKGISGV KVTLKDENGN IISTTTTDEN
GKYQFDNLNS GNYIVHFDKP SGMTQTTTDS GDDDEQDADG EEVHVTITDH DDFSIDNGYY
DDDSDSDSDS DSDSDDSDSD SDSDSDSDSD SDSDSDSDSD SDSDSDSDSD SDSDSDSDSG
LDNSSDKNTK DKLPDTGANE DHDSKGTLLG ALFAGLGALL LGKRRKNRKN KN
|
|---|
| |