Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0131 |
Symbol | ksgA |
ID | 3242671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 122047 |
End bp | 122937 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637166784 |
Product | dimethyladenosine transferase |
Protein accession | YP_187727 |
Protein GI | 57866030 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.273731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATATA AAGATATAGC AACACCATCT CGAACACGTG CTTTGCTTGA TCAATATGGG TTTAATTTTA AGAAAAGTTT AGGACAAAAT TTTCTAATAG ATGTAAATAT CATTAATAAA ATTATCGAAG CGAGTCATAT AGATTGTACA ACGGGTGTAA TTGAAGTTGG ACCAGGTATG GGATCATTGA CTGAACAACT TGCAAAGAAT GCTAAGAAGG TGATGGCTTT TGAAATTGAT CAAAGATTAA TACCTGTGCT TAAAGATACA CTTTCACCAT ACGATAATGT AACAATTATC AATGAAGATA TACTTAAAGC TGATATTGCT AAAGCTGTAG ATACACATCT ACAAGATTGT GACAAGATTA TGGTTGTTGC TAATTTACCG TATTATATTA CCACACCTAT TTTACTTAAT TTGATGCAAC AGGATGTACC TATTGATGGT TTTGTCGTAA TGATGCAAAA AGAGGTAGGA GAACGTTTGA ACGCTCAAGT AGGTACCAAA GCATACGGTT CGTTATCGAT TGTTGCTCAA TACTATACGG AGACAAGTAA AGTTTTAACA GTTCCTAAAA CTGTATTTAT GCCTCCTCCA AACGTTGATT CTATCGTTGT AAAATTGATG CAACGCCAAG AACCACTTGT ACAGGTTGAT GATGAGGAAG GCTTTTTTAA GTTAGCAAAG GCCGCTTTTG CACAACGACG TAAAACAATT AATAATAACT ACCAAAACTT CTTTAAAGAT GGTAAGAAGA ATAAAGAAAC TATACGACAG TGGCTAGAAA GCGCTGGTAT TGATCCTAAA AGACGTGGAG AAACACTCAC GATTCAAGAT TTCGCCACAT TATATGAACA AAAGAAAAAA TTCTCCGAAT TAACAAATTA A
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Protein sequence | MEYKDIATPS RTRALLDQYG FNFKKSLGQN FLIDVNIINK IIEASHIDCT TGVIEVGPGM GSLTEQLAKN AKKVMAFEID QRLIPVLKDT LSPYDNVTII NEDILKADIA KAVDTHLQDC DKIMVVANLP YYITTPILLN LMQQDVPIDG FVVMMQKEVG ERLNAQVGTK AYGSLSIVAQ YYTETSKVLT VPKTVFMPPP NVDSIVVKLM QRQEPLVQVD DEEGFFKLAK AAFAQRRKTI NNNYQNFFKD GKKNKETIRQ WLESAGIDPK RRGETLTIQD FATLYEQKKK FSELTN
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