Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SEA0033 |
Symbol | repA |
ID | 3239132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_006663 |
Strand | - |
Start bp | 26046 |
End bp | 27080 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 637622524 |
Product | replication-associated protein RepA |
Protein accession | YP_187561 |
Protein GI | 57854752 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 0.34337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAAGTCA AAAAGTTATG TGGGTTTGTA ATGTTTTATT ACCTCTATTC AAATTTAATT GGAAAGAGGT TTTTTATTAT GTCTCGTAAA AATATTAAAA ATCAAGCAAG TCAAAACTTT TATATGCTAC ATAAAGCATT ATTTGTTAAT GAAAAATATA AAAAATTAAG TGATAGTGCC AAAGTTACTT ATGCAATTCT CAACGATAGA GTTAGCTTGT CGATTAAAAA TAATTGGGTC GATGATAATG GGGATATATA TTTCATTTTT ACAAATGAAA GTCTCCAGAA TATATTAGAC AAAAGCAAGA ATACAATTAC TAAAATAAAA AAAGAACTTC AAGCAGTAGG GTTACTTGAA CAAATACGTA CAGGATTTAA TAAACCTAAT AAATTATATT TGCATGATAT AGAAACTAAT ATTAGTGTAG AAAAAAGTAT TCAATCCTCA TCTATAACCT ACAATGACAA GGAGTCCCAA AATTTGGGAC TCCAGAATCC CGAAATTTGG GACTCCAGAA ACTCAAAATT TGGGACTCCA GAATCCCAAA TTTTAGACCC TAATGATACT GATTATAATG ATACTGATTA TATTAAGACT GAGAGTAATG ATACGGATGA TTTGAATGAT AAGAAATTAA CATATCCTAA TAATCATACA AATCATTCAA ATCACGACAA TTCAAACTTT AATAATGAGG CTTTAAAATT CCAATTACTC GAAGAACTAC CGCAAAGTAT TCAAAACTAT CTAAGTAACT TTGAAGTAAC TGAAATTGAA ATTATTAAAA CTGTATTATT AAAAGCCAAA ACATCTTTCA ACAATACGAT TGATAGTTAT TACTTGTTAG AAGATATGGA AATCGAAATA CTTCATGTTC TTAAACGTTT CAAAGCTATA CTTATTCAAA AAAATGAAAC CGTTGAAGCC ATGCAAGGAT ACTTAATGAA ATCTCTTAAA TCTGAATTCG CTGAAATGCA TACGCTTAAT AAACGACGTG ATCATTTACC AATCACTTCT TTATTTAATC AATAA
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Protein sequence | MQVKKLCGFV MFYYLYSNLI GKRFFIMSRK NIKNQASQNF YMLHKALFVN EKYKKLSDSA KVTYAILNDR VSLSIKNNWV DDNGDIYFIF TNESLQNILD KSKNTITKIK KELQAVGLLE QIRTGFNKPN KLYLHDIETN ISVEKSIQSS SITYNDKESQ NLGLQNPEIW DSRNSKFGTP ESQILDPNDT DYNDTDYIKT ESNDTDDLND KKLTYPNNHT NHSNHDNSNF NNEALKFQLL EELPQSIQNY LSNFEVTEIE IIKTVLLKAK TSFNNTIDSY YLLEDMEIEI LHVLKRFKAI LIQKNETVEA MQGYLMKSLK SEFAEMHTLN KRRDHLPITS LFNQ
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