Gene SAG2148 details

Gene Information

• Locus tag: SAG2148
• ID: 1014959
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus agalactiae 2603V/R
• Kingdom: Bacteria
• Replicon accession: NC_004116
• Strand: -
• Start bp: 2130448
• End bp: 2130987
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637317313
• Product: LysM domain-containing protein
• Protein accession: NP_689133
• Protein GI: 22538282

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.321456
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAATAA CCTCGGTTAA AAAATCAAAA CCATTTAAAT TAGGAGTGGC AGGTCTTTTA 
GTGGGTGCTT CATTAGCTTT ACCACTTTCA GTAAGCGCAG CATCTTATAC CGTGAAATCA 
GGTGATACCT TATCAGCTAT TGCTAAAAAT CATAAAACTA CGGTACAAGA GTTAGTGTCT 
CTCAATAGTA TCAGTAACGC TGATGTCATC AGTATAGGTG ATGTTTTAAA ATTGGATAAT 
TCTACAGCTA GTCAAGCAGA AGCAAAATCT CAACCAACAA TTGAAAATTC AATGAATTCT 
TCATCAAATT TGAGTTCAAG TGATTCAGCC GCAAAAGAAG AAATAGCTCG TCGTGAATCA 
AATGGTAGTT ATACTGCACA GAATGGACAA TATTATGGAA GATATCAACT GTCTCAATCT 
TACCTAAATG GCGACTTATC TCCTGAAAAT CAAGAAAAAG TAGCGGACAA TTATGTGGTT 
TCTCGTTACG GATCTTGGTC GGCAGCGCTA TCATTTTGGA ATAGTAACGG CTGGTATTAA 

 

Protein sequence

MSITSVKKSK PFKLGVAGLL VGASLALPLS VSAASYTVKS GDTLSAIAKN HKTTVQELVS 
LNSISNADVI SIGDVLKLDN STASQAEAKS QPTIENSMNS SSNLSSSDSA AKEEIARRES 
NGSYTAQNGQ YYGRYQLSQS YLNGDLSPEN QEKVADNYVV SRYGSWSAAL SFWNSNGWY