Gene SAG1782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG1782 
Symbol 
ID1014591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp1775446 
End bp1776228 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content37% 
IMG OID637316950 
ProductTatD family deoxyribonuclease 
Protein accessionNP_688772 
Protein GI22537921 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAA TATTTGATAC CCATACCCAC CTTAACGTAG AAAATTTTGA AGGAAAGATA 
GACGAGGAAA TTAATTTAGC TAGCGAACTC GGTGTTACAA AAATGAATGT TGTCGGCTTT
GACCAAGATA CCATTTCAAA ATCTTTGGAA TTATCTTCCC AATATGCACA GGTATATAGC
ACAATAGGAT GGCATCCAAC TGAAGCTGGT TCTTATGATG ATAATATTGA GTCAATGATT
ATCAGTCATT TAGAAAATCC CAAGGTTATT GCACTTGGTG AAATTGGTCT GGATTATTAT
TGGATGGAGG ATCCCAAAGA TATTCAGATC GAGGTGTTTA AGCGTCAAAT TGAACTTTCA
AAAGAGTATA ACCTTCCTTT TGTCGTTCAT ACACGTGATG CGTTAGAAGA CACTTATGAA
GTCATTAAGG AATCTGGAGT TGGGCCTTTT GGTGGTATAA TGCACTCTTT TTCTGGTTCT
TTGGAAATGG CTCAGAAATT TATTGATTTA GGGATGATGA TTTCCTTTTC TGGTGTTGTG
ACCTTTAAGA AGGCATTAGA TGTACAAGAA GCTGCACGAG AGTTGCCATT AGATAAGATA
TTAGTGGAAA CAGATGCTCC TTATTTGGCT CCTGTACCTA AAAGAGGTCG AGAAAACAAA
ACCGCTTATA CGAGATATGT CGTTGAAAAA ATAGCAGAGC TACGAGGCAT AACTGTGGAA
GAGGTAGCGG AGGCTACATA CCAAAATGCA GTAAGGATAT TTAGACTTGA TGAAAAAAAT
TGA
 
Protein sequence
MIKIFDTHTH LNVENFEGKI DEEINLASEL GVTKMNVVGF DQDTISKSLE LSSQYAQVYS 
TIGWHPTEAG SYDDNIESMI ISHLENPKVI ALGEIGLDYY WMEDPKDIQI EVFKRQIELS
KEYNLPFVVH TRDALEDTYE VIKESGVGPF GGIMHSFSGS LEMAQKFIDL GMMISFSGVV
TFKKALDVQE AARELPLDKI LVETDAPYLA PVPKRGRENK TAYTRYVVEK IAELRGITVE
EVAEATYQNA VRIFRLDEKN