| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG1724 |
|---|
| Symbol | |
|---|
| ID | 1014533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus agalactiae 2603V/R |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004116 |
|---|
| Strand | + |
|---|
| Start bp | 1717459 |
|---|
| End bp | 1719879 |
|---|
| Gene Length | 2421 bp |
|---|
| Protein Length | 806 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637316892 |
|---|
| Product | helicase, putative |
|---|
| Protein accession | NP_688714 |
|---|
| Protein GI | 22537863 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
|---|
| TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGTAT TTTTTACAGG AACCATTGAA CGCATTATAT TTGAAAATGC CAGCAATTTT
TTTAAAATAT TACTTCTGGA AATCGAAGAT ACGGATAGCG ATTTTGATGA TGTAGAAGTA
ATTATTACTG GTACTATGGC CGACGTTATA GAGGGAGAAG AATATACTTT TTGGGGAACA
CTAACCCAAC ATCCAAAATA CGGCGAGCAA CTACAAAGTG TACGCTATGA AAGAGCCAAG
CCTACTTCAG GTGGCCTTGT GAAATACTTT TCTAGCGAAC AATTTAAAGG AATTGGTAAA
AAGACTGCCC AACGCATCGT AGAACTCTAT GGAGATAATA CCATTGATAA AATCCTTGAA
TCCCCTGAAC AGTTAAGTAC AATCTCAGGA CTATCAAAAA TTAATAGAGA AGCATTCATC
GCTAAACTGA AACTCAATTA TGGAACAGAG CAAGTTTTAG CTAAACTCGC TGAATATGGG
TTAAGCAATC GTGCTGCTAT TCAAATATTT GATCACTATA AAGAAGAATC ACTTGAAGTG
ATAAACGAAA ATCCTTATCA ACTTGTTGAG GATATCCAAG GTATCGGTTT TAAAATAGCT
GACCAACTTG CTGAACAAGT CGGTATTGAA AGTGATTCTC CTAAACGCTT TCGTGCTGCT
ATTATTCATA CTTTAGTTGA GTCTTCTATG GAGCAAGGAG ATACCTATAT TGAGGCTCGT
ACTCTCTTGG AAAAAACCAT TACTCTCCTT GAAGAAGCTC GTCAAATCGA ACTAGATCCT
TCAATTGTTG CTAAGGAATT GACAAATTTA ATTGCAGAAG ATAAAGTGCA ACATATTGGA
ACTAAAATTT TTAGTAATAC TCTATTTTTT GCCGAAGAAG GCATCAAAAA AAACTTACAA
CGAATACTAA ATCAGCCTCT TGATAAACAA CTAAATCACA AAGATATTGA CCGTGAAATC
AGAGATATTC AAAAATCTTT AAATATCCAC TACGATAATA TCCAAGAAAA AGCTATTAGA
GAAGCTTTAC TAAGTAAGGT ATTTATCTTG ACTGGTGGCC CAGGAACAGG TAAAACAACA
GTTATAAATG GTATTATTGA AGCCTATTCC GAGTTACATC ATATTGATTT AAACAAAAAT
GATATTCCTA TTGTACTTGC TGCTCCTACA GGTCGTGCTG CTAGACGCAT GAATGAACTT
ACCGGTTTAC CGAGTGCTAC TATTCATAGG CATTTGGGAT TAAACGGAGA TAGTGACTAT
CAAAGTCTAG ATGACTATCT AGATTGTTCC TTAATTATCA TTGATGAATT TTCAATGGTT
GACACTTGGC TTGCTAATCA ATTATTTGAC GCTTTGGACT CGCACACACA AGTTATTATT
GTCGGAGATA GTGATCAATT ACCGTCTGTA GGTCCAGGAC AAGTTCTAGC AGATCTTTTA
AATATAAATG CACTTCCACA CGTTAAACTT GAAAAGATTT TTAGACAATC AGAAGAATCA
ACTATTGTGA CTTTAGCTAA TCAAATGAGA CAGGGCTTTT TGCCAGAGGA CTTTACAGCT
AAAAAAGCCG ATCGCTCATA CTTTGAAGCA TCTGCTAATA TCATCCCAAA TATGATTTCT
AAAATTGTTC AATCTGCACT TAAGAGCGGT ATTGAAGCTC ATGAAATTCA AATTTTAGCT
CCTATGTATC GCGGCCAAGC AGGTATTAAT AATCTTAACC TTATCATGCA AAATCTCCTC
AATCCATTAA AAGATAATAA CCAATTTACT TTTAATGATA TAAATTTCCG AATAGGAGAT
AAAGTGTTAC ATTTAGTCAA CGATACAGAG CTTAATGTTT TTAATGGGGA TATTGGTTAC
ATAACGGACC TTATACCAGC CAAATATACT GAGAGCAAGC AAGATGAGAT TTATATGACT
TTTGACGGTC AAGAAGTTAT CTATCAACGC AAAGAATGGC TTAAAATAAC ACTAGCCTAT
GCTATGAGTA TTCATAAATC ACAGGGTTCT GAATTTCAAG TTGTTATTCT GCCAATAACG
AGACAGAGTG GTCGAATGTT ACAGCGAAAC CTTATTTATA CAGCTATTAC GAGATCTAAA
AGTAAACTAA TACTTTTAGG AGAAATTGGT GCATTTGATT TCGCTGTTAA AAACGAGGGG
GCAAAGCGCA ATACTTATCT GATAGAAAGA TTTGAAAACA AGCAAGAAAT AGCTAATTCT
CAAAAAATTG AAGATAGCTC AATAGATCAA AAGATTGACA ACACAATAAT TAATACGTCC
ATTCCAAAAA CAGCAACACC AATTGAGCAG ACTAATCTTT CAAAAATAAC TTATCGCCTA
ACTGAAGAAA ATTATTTAAC AATCGATCCA ATGATTGGTA TTAATCAACA AGATATAAGT
GCAATTTTTG ATAGTAAATA A
|
|---|
| Protein sequence | MEVFFTGTIE RIIFENASNF FKILLLEIED TDSDFDDVEV IITGTMADVI EGEEYTFWGT
LTQHPKYGEQ LQSVRYERAK PTSGGLVKYF SSEQFKGIGK KTAQRIVELY GDNTIDKILE
SPEQLSTISG LSKINREAFI AKLKLNYGTE QVLAKLAEYG LSNRAAIQIF DHYKEESLEV
INENPYQLVE DIQGIGFKIA DQLAEQVGIE SDSPKRFRAA IIHTLVESSM EQGDTYIEAR
TLLEKTITLL EEARQIELDP SIVAKELTNL IAEDKVQHIG TKIFSNTLFF AEEGIKKNLQ
RILNQPLDKQ LNHKDIDREI RDIQKSLNIH YDNIQEKAIR EALLSKVFIL TGGPGTGKTT
VINGIIEAYS ELHHIDLNKN DIPIVLAAPT GRAARRMNEL TGLPSATIHR HLGLNGDSDY
QSLDDYLDCS LIIIDEFSMV DTWLANQLFD ALDSHTQVII VGDSDQLPSV GPGQVLADLL
NINALPHVKL EKIFRQSEES TIVTLANQMR QGFLPEDFTA KKADRSYFEA SANIIPNMIS
KIVQSALKSG IEAHEIQILA PMYRGQAGIN NLNLIMQNLL NPLKDNNQFT FNDINFRIGD
KVLHLVNDTE LNVFNGDIGY ITDLIPAKYT ESKQDEIYMT FDGQEVIYQR KEWLKITLAY
AMSIHKSQGS EFQVVILPIT RQSGRMLQRN LIYTAITRSK SKLILLGEIG AFDFAVKNEG
AKRNTYLIER FENKQEIANS QKIEDSSIDQ KIDNTIINTS IPKTATPIEQ TNLSKITYRL
TEENYLTIDP MIGINQQDIS AIFDSK
|
|---|
| |