Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SAG1645 |
Symbol | |
ID | 1014454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus agalactiae 2603V/R |
Kingdom | Bacteria |
Replicon accession | NC_004116 |
Strand | - |
Start bp | 1646955 |
End bp | 1647671 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637316814 |
Product | hypothetical protein |
Protein accession | NP_688636 |
Protein GI | 22537785 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0393041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGACGTA AGTGGGCCAA TATTGTTGCC AAAAAGACTG CTAAAGATGG TGCTAACTCA AAAGTATACG CTAAATTCGG TGTTGAAATA TATGTTGCTG CAAAGCAAGG TGAACCAGAC CCCGAGTCAA ACTCAGCTCT AAAATTCGTT TTGGACCGTG CTAAGCAAGC ACAAGTTCCA AAGCATGTTA TTGATAAAGC GATTGATAAA GCCAAAGGAA ACACAGATGA AACTTTCGTA GAGGGACGCT ATGAAGGTTT TGGTCCAAAT GGTTCAATGA TTATTGTGGA TACTTTGACA TCAAATGTTA ACCGTACGGC AGCAAATGTA CGTACTGCTT ACGGTAAGAA CGGTGGCAAT ATGGGAGCTT CAGGATCGGT ATCCTACTTA TTTGATAAAA AAGGTGTCAT CGTTTTTGCT GGTGATGATG CTGACACTGT CTTCGAACAA TTACTTGAAG CGGATGTAGA CGTAGATGAT GTTGAAGCAG AAGAGGGAAC AATAACAGTT TATACCGCCC CAACAGATCT TCATAAAGGT ATCCAAGCAC TTCGCGATAA TGGTGTAGAA GAATTCCAAG TTACTGAACT TGAAATGATT CCTCAATCAG AAGTAGTATT GGAAGGTGAT GACCTTGAAA CTTTTGAAAA GCTTATTGAC GCACTCGAAT CAGATGATGA TGTTCAAAAA GTTTATCATA ATGTAGCAGA TTTCTAA
|
Protein sequence | MGRKWANIVA KKTAKDGANS KVYAKFGVEI YVAAKQGEPD PESNSALKFV LDRAKQAQVP KHVIDKAIDK AKGNTDETFV EGRYEGFGPN GSMIIVDTLT SNVNRTAANV RTAYGKNGGN MGASGSVSYL FDKKGVIVFA GDDADTVFEQ LLEADVDVDD VEAEEGTITV YTAPTDLHKG IQALRDNGVE EFQVTELEMI PQSEVVLEGD DLETFEKLID ALESDDDVQK VYHNVADF
|
| |