| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG1625 |
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| Symbol | csrR |
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| ID | 1014434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus agalactiae 2603V/R |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004116 |
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| Strand | - |
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| Start bp | 1627766 |
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| End bp | 1628455 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637316794 |
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| Product | DNA-binding response regulator CsrR |
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| Protein accession | NP_688616 |
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| Protein GI | 22537765 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.137799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTAAAA AGATCTTAAT AATCGAAGAT GAGAAAAATT TAGCTCGCTT CGTCTCGTTA
GAACTACTAC ATGAAGGATA TGATGTTGTT GTTGAAACAA ACGGTCGTGA AGGATTGGAC
ACAGCATTAG AAAAAGATTT TGATTTGATT CTACTGGATT TAATGCTTCC AGAGATGGAT
GGTTTCGAAA TCACACGTCG CCTGCAGGCT GAAAAAACAA CCTATATCAT GATGATGACA
GCACGTGATT CTGTTATGGA TATTGTAGCT GGTCTTGATC GTGGAGCAGA TGATTATATT
GTTAAGCCGT TTGCAATCGA AGAATTATTA GCACGTGTTA GAGCGATTTT CCGACGCCAA
GAAATTGAAA CGAAGACAAA AGAAAAAGGT GATAGTGGTA GTTTCCGTGA TTTGTCATTA
AATACTCATA ATCGTTCAGC GATGCGTGGT GATGAGGAAA TTTCACTAAC AAAACGTGAA
TTTGATTTGT TGAATGTCTT GATGACAAAT ATGAATCGTG TTATGACACG AGAAGAGTTG
CTAGAACATG TTTGGAAATA CGATGTGGCA GCAGAGACAA ACGTTGTTGA TGTTTATATC
CGTTACCTAA GAGGTAAAAT TGATATCCCA GGTCGTGAAT CATATATTCA AACTGTTCGC
GGAATGGGCT ATGTGATTCG TGAAAAATAA
|
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| Protein sequence | MGKKILIIED EKNLARFVSL ELLHEGYDVV VETNGREGLD TALEKDFDLI LLDLMLPEMD
GFEITRRLQA EKTTYIMMMT ARDSVMDIVA GLDRGADDYI VKPFAIEELL ARVRAIFRRQ
EIETKTKEKG DSGSFRDLSL NTHNRSAMRG DEEISLTKRE FDLLNVLMTN MNRVMTREEL
LEHVWKYDVA AETNVVDVYI RYLRGKIDIP GRESYIQTVR GMGYVIREK
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