| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG1585 |
|---|
| Symbol | clpP |
|---|
| ID | 1014394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus agalactiae 2603V/R |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004116 |
|---|
| Strand | - |
|---|
| Start bp | 1590344 |
|---|
| End bp | 1590934 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637316754 |
|---|
| Product | ATP-dependent Clp protease proteolytic subunit |
|---|
| Protein accession | NP_688576 |
|---|
| Protein GI | 22537725 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
|---|
| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0454013 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCCAG TAGTTATTGA ACAAACAAGT CGTGGTGAAC GTTCTTATGA TATTTACTCA
CGTCTTTTAA AAGATCGTAT TATTATGTTG ACAGGCCAAG TTGAGGATAA TATGGCCAAT
AGTATCATTG CACAGTTATT GTTTCTCGAT GCACAAGATA ATACAAAGGA TATTTACCTT
TATGTCAATA CACCAGGTGG TTCAGTATCG GCTGGACTTG CTATTGTGGA CACCATGAAC
TTCATTAAAT CGGACGTACA GACGATTGTT ATGGGGATGG CTGCTTCGAT GGGAACCATT
ATTGCTTCAA GTGGTGCTAA AGGAAAACGT TTTATGTTAC CGAATGCAGA ATATATGATC
CACCAACCAA TGGGCGGAAC AGGCGGAGGT ACACAGCAAT CTGATATGGC TATCGCTGCT
GAGCATCTTT TAAAAACGCG TCATACTTTA GAAAAAATCT TAGCTGATAA TTCTGGTCAA
TCTATTGAAA AAGTCCATGA TGATGCAGAG CGTGATCGTT GGATGAGTGC TCAAGAAACA
CTTGATTATG GCTTTATTGA TGCTATTATG GAAAATAATA ATTTACAATA A
|
|---|
| Protein sequence | MIPVVIEQTS RGERSYDIYS RLLKDRIIML TGQVEDNMAN SIIAQLLFLD AQDNTKDIYL
YVNTPGGSVS AGLAIVDTMN FIKSDVQTIV MGMAASMGTI IASSGAKGKR FMLPNAEYMI
HQPMGGTGGG TQQSDMAIAA EHLLKTRHTL EKILADNSGQ SIEKVHDDAE RDRWMSAQET
LDYGFIDAIM ENNNLQ
|
|---|
| |