Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SAG1424 |
Symbol | rfbD |
ID | 1014233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus agalactiae 2603V/R |
Kingdom | Bacteria |
Replicon accession | NC_004116 |
Strand | - |
Start bp | 1435876 |
End bp | 1436730 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637316599 |
Product | dTDP-4-dehydrorhamnose reductase |
Protein accession | NP_688421 |
Protein GI | 22537570 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000208207 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTAA TTACAGGGGC AAACGGGCAA TTAGGTAGTG AATTACGTCA CCTTTTAGAC GAACGAACTC AAGAGTATGT TGCTGTTGAT GTAGCTGAAA TGGATATTAC AAATGCCGAG ATGGTGGACA AAGTCTTTGA AGAGGTGAAG CCATCTTTAG TTTACCATTG TGCAGCTTAC ACAGCTGTTG ATGCGGCAGA AGATGAAGGA AAAGAGCTAG ACTTTGCAAT CAATGTCACT GGTACAGAGA ATGTCGCTAA GGCTGCTGCT AAACATGATG CAACACTTGT TTACATTTCG ACGGACTACG TGTTTGATGG TGAAAAACCA GTGGGGCAAG AATGGGAAGT AGATGATCTG CCTGATCCCA AAACAGAGTA CGGTCGTACA AAACGTATGG GTGAAGAGTT AGTTGAAAAA TATACTTCAA AATTCTATAC CATTCGCACA GCGTGGGTAT TTGGTAACTA TGGTAAAAAC TTTGTCTTTA CGATGCAAAA CCTTGCAAAA ACACACAAAA CTCTAACTGT TGTTAACGAC CAACATGGAC GACCAACATG GACACGTACT TTGGCTGAGT TTATGACTTA TTTAGCTGAA AATCAAAAAG ATTTTGGTTA CTATCATTTA TCAAATGATG CTAAAGAAGA TACAACATGG TATGATTTTG CGGTTGAAAT CTTAAAAGAC ACAGATGTGG AGGTTAAGCC TGTTGATTCT AGTCAATTCC CAGCAAAAGC AAAACGTCCT TTAAATTCAA CTATGAGTTT GGAAAAAGCG AAAGCAACAG GATTTGTGAT TCCTACTTGG CAAGATGCTT TAAAAGAGTT CTACAAGCAG GAAGTTAAAA AATAA
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Protein sequence | MILITGANGQ LGSELRHLLD ERTQEYVAVD VAEMDITNAE MVDKVFEEVK PSLVYHCAAY TAVDAAEDEG KELDFAINVT GTENVAKAAA KHDATLVYIS TDYVFDGEKP VGQEWEVDDL PDPKTEYGRT KRMGEELVEK YTSKFYTIRT AWVFGNYGKN FVFTMQNLAK THKTLTVVND QHGRPTWTRT LAEFMTYLAE NQKDFGYYHL SNDAKEDTTW YDFAVEILKD TDVEVKPVDS SQFPAKAKRP LNSTMSLEKA KATGFVIPTW QDALKEFYKQ EVKK
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