Gene SAG1189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG1189 
Symbol 
ID1013996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand- 
Start bp1192251 
End bp1193255 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content36% 
IMG OID637316374 
Producthypothetical protein 
Protein accessionNP_688198 
Protein GI22537347 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00418408 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA AAGGGCTGAT AGCTACGCTA ATTCTATTGA CTATATTAGT GGTTGGAGAA 
TTATTTTATA ACAAATCAGA AAAACGTCTT AATTTATCAG AAAAGCAAGT TGTTAAAATT 
GGTATTTTAC AGTATGTAAC CCATGATGCT TTGGATGCTA TTGAAAAGGG AGTTGAAGAT 
GGTCTAGCTC AAGAAGGATA TAAAGGGAAA AAAGTTAAAT TAACCGTTTT AAACGCCGAA 
GCTGATCAAA GTAAAATTCA AGCGATGAGT AAACAATTAG TTAATCATCA CAATGATATT 
TTGATTGGAA TTGCGACACC ATCAGCACAA GGTTTAGCAG CTTCGACTAA GGACACTCCT 
ATAATCATGG GAGCTGTTTC TGATCCTTTA GGGGCCAAGT TAGTAACGAA TATGAAGAAA 
CCAACAACTA ATGTTACAGG ATTATCAAAC GTTGTTCCGA CCAAGCAAAC TGTGCAATTA 
ATCAAGGATA TAACTCCCAA TATTAAACGT ATAGGAATTC TTTATGCTAG TAGCGAAGAT 
AATTCTGTAT CACAAGTAAC TGAGTTTACA AAATATGCTC AAAAAGCAGG GCTAGAAGTT 
CTTAAATATT CTGTACCATC TACAAATGAA ATTAAGACAA GTATGTCAGT CATGACCAAA 
AAAGTAGACG CTGTCTTTGT TCCACAAGAT AATACTATTG CGAGTGCTTT TAGAACAGTT 
ATCGTAGCAG CAAACCAAGC TAATATACCT GTGTATTCCA GTGTTGATAC CATGGTTGAA 
CAAGGAAGTA TAGCATCAGT AGCGCAGAGT CAATATGGCT TAGGGTTAGA AACTGCAAAA 
CAGGCCATTA AAGTCCTAAG AGGGAAGCCG GTTAAAGATG TACCAGTCAA AGTTATTGAT 
ACAGGGAAGC CAAGCCTCAA TTTGAAAGCA GCCAAACACT TAGGAATTAA AATTCCTAAG 
AAGATTATGA AACAGGCAGA AATTACCGTT AAGGTTGACG ATTAG
 
Protein sequence
MKNKGLIATL ILLTILVVGE LFYNKSEKRL NLSEKQVVKI GILQYVTHDA LDAIEKGVED 
GLAQEGYKGK KVKLTVLNAE ADQSKIQAMS KQLVNHHNDI LIGIATPSAQ GLAASTKDTP 
IIMGAVSDPL GAKLVTNMKK PTTNVTGLSN VVPTKQTVQL IKDITPNIKR IGILYASSED 
NSVSQVTEFT KYAQKAGLEV LKYSVPSTNE IKTSMSVMTK KVDAVFVPQD NTIASAFRTV 
IVAANQANIP VYSSVDTMVE QGSIASVAQS QYGLGLETAK QAIKVLRGKP VKDVPVKVID 
TGKPSLNLKA AKHLGIKIPK KIMKQAEITV KVDD