Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SAG1166 |
Symbol | cpsN |
ID | 1013973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus agalactiae 2603V/R |
Kingdom | Bacteria |
Replicon accession | NC_004116 |
Strand | - |
Start bp | 1170946 |
End bp | 1171833 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 637316351 |
Product | glycosyl transferase CpsN(V) |
Protein accession | NP_688175 |
Protein GI | 22537324 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00222064 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATATA TTTTTACTCC TACATTTAAC AGAGGCTACC GATTATCCTA TCTGTATGAT TCTCTATGTA ATCAGACAAA TAAAAATTTT ATATGGTTGA TTGTTGATGA TGGTTCTGAG GACAGTACTA AGGAAATTGT AAGTAATTAT ATAAAAGAGA ATAAAGTTAG TATTGTATAT CTGTATAAAC GTAATGGCGG TAAGCATTCA GCCTATAATC TAGCAATGAG ATATATGCAA CCAAGTGATT ATCATGTATG TGTAGATAGT GATGATTGGT TATTAGAAGA TGCAGTTGAA ATTATTTTTA AAGATTTAGA GAGCCTAACG TTGTCTAATA GATATGTAGG CCTTGTTTAT CCTCGATATT CATTAAACCA AGGTAATAAT TGGTTGAATC CCAAAATATT AGAAGTTAAT ATTCCTGATT TAAAATATAA ATATCACTTA AAAATTGAAA CTTGTATTGT TATTAATAAT GCTTATTTAG TAGATTTCGA ATTTCCTTGT TTCGAAGGGG AGAATTTCTT ATCAGAAGAA ATAATGTATA TATATTTATC AAAAAAGGGA TACTTTTGTC CCCAAAATAG GAAAATCTAT TGTTTTGACT ACTTAGAAGA TGGTTTGACT TCTAATATTT TTAAATTATG GAGAAAAAAT TTCAAAGGGA CTATTTTTTC ATTAGAAAAT TCATATATGT ATGTAATGTC TTTTCCTAAT ATATTTGATC GCTGGTGGTC AGCTATAAAG ATAAAAATGA ACATACAGGC TTTGAAAATG ACTACTTTAG GGGTAATACC TACACTAAAG AGTGAAGAGG CTGGGTGGAA AATTTTGTTG GGTTTTAGCT ATCTTTGGAA GGTAGCAAGG TTTAAAAAGA GCGAGTAA
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Protein sequence | MLYIFTPTFN RGYRLSYLYD SLCNQTNKNF IWLIVDDGSE DSTKEIVSNY IKENKVSIVY LYKRNGGKHS AYNLAMRYMQ PSDYHVCVDS DDWLLEDAVE IIFKDLESLT LSNRYVGLVY PRYSLNQGNN WLNPKILEVN IPDLKYKYHL KIETCIVINN AYLVDFEFPC FEGENFLSEE IMYIYLSKKG YFCPQNRKIY CFDYLEDGLT SNIFKLWRKN FKGTIFSLEN SYMYVMSFPN IFDRWWSAIK IKMNIQALKM TTLGVIPTLK SEEAGWKILL GFSYLWKVAR FKKSE
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