Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SAG1142 |
Symbol | pcrA |
ID | 1013946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus agalactiae 2603V/R |
Kingdom | Bacteria |
Replicon accession | NC_004116 |
Strand | - |
Start bp | 1143007 |
End bp | 1145286 |
Gene Length | 2280 bp |
Protein Length | 759 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637316324 |
Product | ATP-dependent DNA helicase PcrA |
Protein accession | NP_688151 |
Protein GI | 22537300 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00645373 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCCTT TAATAATTGG AATGAATGAT AAACAAGCAG AAGCGGTACA AACGACAGAC GGACCGCTTT TGATTATGGC AGGAGCTGGC TCTGGAAAAA CACGTGTTCT GACTCATCGT ATTGCTTATT TAATAGATGA AAAATATGTT AATCCTTGGA ATATTTTAGC GATTACTTTT ACTAATAAAG CAGCGCGTGA AATGCGTGAA CGTGCTATCG CCTTGAATCC AGCTACCCAA GATACTTTGA TTGCAACTTT TCATAGTATG TGTGTTCGTA TTTTACGTCG TGAAGCTGAT TATATTGGAT ATAATCGTAA CTTTACAATC GTTGATCCAG GTGAGCAGCG TACTTTAATG AAGCGAATCA TTAAGCAATT AAATTTGGAC ACAAAAAAGT GGAATGAACG TTCAATTTTA GGTACAATCT CTAATGCTAA AAATGACCTT CTTGATGAAA TTGCATATGA GAAGCAAGCC GGAGATATGT ATACACAGGT AATTGCTAAA TGCTATAAAG CTTATCAAGA GGAATTACGT AGAAGTGAGG CCATGGATTT CGATGACTTG ATTATGATGA CACTTCGATT ATTTGATCAG AATAAAGATG TTTTGGCCTA TTACCAACAG AGGTATCAAT ATATCCATGT AGACGAGTAT CAAGATACTA ACCACGCTCA ATACCAATTA GTTAAGTTAT TAGCTTCGCG TTTCAAAAAT ATTTGTGTTG TTGGTGATGC CGATCAATCC ATTTACGGAT GGCGTGGAGC TGATATGCAA AATATTCTTG ATTTTGAAAA GGACTATCCG CAAGCCAAAG TTGTATTATT AGAAGAAAAT TATCGATCGA CTAAGAAAAT ACTTCAAGCT GCTAATAATG TGATTAATCA TAATAAAAAT CGCCGTCCCA AAAAATTATG GACTCAAAAT GATGAAGGTG AGCAAATTGT ATATCATAGA GCTAACAACG AGCAAGAAGA AGCAGTTTTT GTAGCATCAA CTATTGATAA CATCGTTCGA GAACAAGGAA AAAATTTCAA AGATTTTGCC GTTCTTTATC GTACGAATGC GCAATCTCGT ACTATTGAGG AAGCACTTTT AAAATCCAAT ATTCCATATA CAATGGTTGG TGGAACAAAA TTCTATAGTC GTAAAGAAAT TCGAGATGTT ATTGCTTATC TCAATATCCT TGCAAATACT TCTGATAATA TTTCTTTTGA GCGGATTGTA AATGAACCTA AAAGAGGGGT GGGGCCAGGA ACTTTAGAAA AAATACGGTC ATTTGCCTAT GAACAGAGCA TGTCTCTTCT TGATGCCTCT TCAAATGTCA TGATGTCGCC CTTAAAAGGG AAGGCTGCTC AAGCTGTTTG GGATTTAGCT AATCTGATTT TGACTCTACG TAGTAATCTA GATAGTTTAA CTGTAACGGA GATTACAGAA AACCTACTGG ATAAGACAGG ATATCTAGAA GCACTTCAAG TTCAAAATAC ATTAGAAAGT CAAGCGCGTA TTGAAAATAT TGAAGAATTC TTGTCAGTGA CTAAAAATTT TGACGATAAC CCAGAGATTA CAGTAGAGGG TGAAACTGGT TTAGATCGTC TATCGCGTTT TTTAAATGAT TTAGCTTTAA TAGCAGATAC TGATGATAGC GCCACTGAAA CGGCTGAGGT CACTTTAATG ACATTACATG CTGCCAAGGG TCTAGAATTT CCAGTTGTTT TCTTAATCGG TATGGAAGAA GGAGTATTTC CTTTATCGCG TGCAATAGAG GATGCTGATG AATTAGAAGA AGAGCGTCGT TTAGCTTATG TCGGGATTAC GAGAGCAGAA CAAATACTTT TCCTTACCAA TGCTAATACC CGTACTTTAT TTGGTAAAAC TAGTTATAAT AGACCAACCC GTTTTATACG TGAGATTGAT GATGAACTGA TACAATACCA AGGGTTAGCT CGACCAGTTA ATTCTTCATT TGGTGTGAAA TATTCAAAAG AACAGCCTAC ACAATTTGGT CAAGGAATGA GTCTTCAACA AGCGCTTCAG GCACGTAAAA GTAATTCACA ATCTCAAGTA ACTGCCCAAC TCCAGGCTCT TAACGCGAAC AATAGCCATG AGACATCATG GGAGATTGGT GATGTTGCAA CTCATAAAAA ATGGGGGGAC GGTACGGTGC TTGAAGTTTC AGGTAGCGGA AAGACTCAAG AGTTAAAAAT AAATTTTCCA GGTATTGGGT TAAAGAAATT ATTAGCGAGT GTCGCTCCTA TTAGCAAAAA GGAAAACTAA
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Protein sequence | MNPLIIGMND KQAEAVQTTD GPLLIMAGAG SGKTRVLTHR IAYLIDEKYV NPWNILAITF TNKAAREMRE RAIALNPATQ DTLIATFHSM CVRILRREAD YIGYNRNFTI VDPGEQRTLM KRIIKQLNLD TKKWNERSIL GTISNAKNDL LDEIAYEKQA GDMYTQVIAK CYKAYQEELR RSEAMDFDDL IMMTLRLFDQ NKDVLAYYQQ RYQYIHVDEY QDTNHAQYQL VKLLASRFKN ICVVGDADQS IYGWRGADMQ NILDFEKDYP QAKVVLLEEN YRSTKKILQA ANNVINHNKN RRPKKLWTQN DEGEQIVYHR ANNEQEEAVF VASTIDNIVR EQGKNFKDFA VLYRTNAQSR TIEEALLKSN IPYTMVGGTK FYSRKEIRDV IAYLNILANT SDNISFERIV NEPKRGVGPG TLEKIRSFAY EQSMSLLDAS SNVMMSPLKG KAAQAVWDLA NLILTLRSNL DSLTVTEITE NLLDKTGYLE ALQVQNTLES QARIENIEEF LSVTKNFDDN PEITVEGETG LDRLSRFLND LALIADTDDS ATETAEVTLM TLHAAKGLEF PVVFLIGMEE GVFPLSRAIE DADELEEERR LAYVGITRAE QILFLTNANT RTLFGKTSYN RPTRFIREID DELIQYQGLA RPVNSSFGVK YSKEQPTQFG QGMSLQQALQ ARKSNSQSQV TAQLQALNAN NSHETSWEIG DVATHKKWGD GTVLEVSGSG KTQELKINFP GIGLKKLLAS VAPISKKEN
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