| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG0824 |
|---|
| Symbol | |
|---|
| ID | 1013628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus agalactiae 2603V/R |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004116 |
|---|
| Strand | + |
|---|
| Start bp | 823675 |
|---|
| End bp | 824928 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637316012 |
|---|
| Product | polysaccharide deacetylase family protein |
|---|
| Protein accession | NP_687839 |
|---|
| Protein GI | 22536988 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00745261 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAT TAATTATAGG TATTTTTAGT CTAATTATTA TAGCGATTCT TGCTTGGCAA
GGTTTTTCGT TTTTGAAACA TAAAGAAATA AAACTTCAAC AAGCTGTTGT TGAAAAAGAA
ATTCGCATAG CCGAGAAAAC GGTAGAAGTG GTGAAAAGAC AGAAAACTGA ACGTGTTCTT
TTTCTTGAAC CTAAAGGATA TGACAAAAGT CTAAGCGCTG ATATTTTAAA GTGGAATCAA
AAAAGCTTTG AGCATAAAAA ATTTTATGAC AATCAATACA TTATTCTACG TCCTCAATTA
GCAGATTCTA ACTTTGCAAA TGTTAAAAAA TTATCCATTT ATCAAATCTT ATATCAAAAA
GAAAAAGGAA GTATGTTTCA AAAATCAAGT CGCCTTTTGA GAACCTACTT ACTTGATCAA
AATAAGAAAC CTTTTGAATT AGATGAGCTT TTAGCTCATA ATATATCTGG ATTTAAGGCT
ATTTTAGAAA ATATAGCTCC AGGAACTCAA CTAAAGGAAC ATGATAGCAA TAAAGAATTT
TTAAAAACTG GAAGAGTAAC AGATGGGCTA GATGTTAAAG ATGGTAAGTT AATTATTAAT
GATTTAAAAT TACCACTTGA TAAATTATAT AATGTGATCG ATGAGTCATA TTTAAAATCA
AGTGATCTAG ATTTAGTTTC TAATTTAAAA GCTAAAGCAC CACGTGTTGC ACTTACCTTT
GATGATGGAC CAAATGAAAA AACGACTCCT AAAGCCTTAG AAATCCTTAA AAGATATAAT
GCTAAAGCGA CTTTCTTTGT AATGGGACAA AGTGCTGTAG GGCACACAGA TATTTTACAA
AGGATGCATG CTGAAGGTCA TGAGATTGGT AATCATACAT GGGATCATCC TAATTTAACC
AAACTACCAG CGGAGAAAAT CAAGGAAGAG ATTCATAAGA CTAATGATCT GATTATGAAA
GCAACAGGAC AAAAACCGGT GTACTTACGT CCCCCTTACG GAGCAACAAA TGCTACTGTA
AAAACAGTGA CAGGATTGAA AGAAATGTTG TGGTCAGTTG ATACAGAAGA CTGGAAAAAT
CATAATACAC AAGCAATGAT GACCAATATC AAAAAACAAT TACGTCCTGG AGGAGTGATT
TTGATGCATG ATATTCACCA GACAACCATA GATGCTCTGC CTACAATTAT GGATTATCTG
ACAACCCAGG GCTATTATTT TGTTACTGTA GGTGAATTAT ATTCAACGCC TTAA
|
|---|
| Protein sequence | MKKLIIGIFS LIIIAILAWQ GFSFLKHKEI KLQQAVVEKE IRIAEKTVEV VKRQKTERVL
FLEPKGYDKS LSADILKWNQ KSFEHKKFYD NQYIILRPQL ADSNFANVKK LSIYQILYQK
EKGSMFQKSS RLLRTYLLDQ NKKPFELDEL LAHNISGFKA ILENIAPGTQ LKEHDSNKEF
LKTGRVTDGL DVKDGKLIIN DLKLPLDKLY NVIDESYLKS SDLDLVSNLK AKAPRVALTF
DDGPNEKTTP KALEILKRYN AKATFFVMGQ SAVGHTDILQ RMHAEGHEIG NHTWDHPNLT
KLPAEKIKEE IHKTNDLIMK ATGQKPVYLR PPYGATNATV KTVTGLKEML WSVDTEDWKN
HNTQAMMTNI KKQLRPGGVI LMHDIHQTTI DALPTIMDYL TTQGYYFVTV GELYSTP
|
|---|
| |