| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG0648 |
|---|
| Symbol | |
|---|
| ID | 1013452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus agalactiae 2603V/R |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004116 |
|---|
| Strand | + |
|---|
| Start bp | 635571 |
|---|
| End bp | 636353 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637315841 |
|---|
| Product | sortase family protein |
|---|
| Protein accession | NP_687668 |
|---|
| Protein GI | 22536817 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
|---|
| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAGTC TGATTCTCTT ATTTCCGATT GTGAGCCAGG TAAGTTACTA CCTTGCTTCG
CATCAAAATA TTAATCAATT TAAGCGGGAA GTCGCTAAGA TTGATACTAA TACGGTTGAA
CGACGCATCG CTTTAGCTAA TGCTTACAAT GAGACGTTAT CAAGGAATCC CTTGCTTATA
GACCCTTTTA CCAGTAAGCA AAAAGAAGGT TTGAGAGAGT ATGCTCGTAT GCTTGAAGTT
CATGAGCAAA TAGGTCATGT GGCAATCCCA AGTATTGGGG TTGATATTCC AATTTATGCT
GGAACATCCG AAACTGTGCT TCAGAAAGGT AGTGGGCATT TGGAGGGAAC CAGTCTTCCA
GTGGGAGGTT TGTCAACCCA TTCAGTACTA ACTGCCCACC GTGGCTTGCC AACAGCTAGG
CTATTTACCG ACTTAAATAA AGTTAAAAAA GGCCAGATTT TCTATGTGAC GAACATCAAG
GAAACACTTG CCTACAAAGT CGTGTCTATC AAAGTTGTGG ATCCAACAGC TTTAAGTGAG
GTTAAGATTG TCAATGGTAA GGATTATATA ACCTTGCTGA CTTGCACACC TTACATGATC
AATAGTCATC GTCTCTTGGT AAAAGGAGAG CGTATTCCTT ATGATTCTAC CGAGGCGGAA
AAGCACAAAG AACAAACCGT ACAAGATTAT CGTTTGTCAC TAGTGTTGAA GATACTACTA
GTATTATTAA TTGGACTCTT CATCGTGATA ATGATGAGAA GATGGATGCA ACATCGTCAA
TAA
|
|---|
| Protein sequence | MGSLILLFPI VSQVSYYLAS HQNINQFKRE VAKIDTNTVE RRIALANAYN ETLSRNPLLI
DPFTSKQKEG LREYARMLEV HEQIGHVAIP SIGVDIPIYA GTSETVLQKG SGHLEGTSLP
VGGLSTHSVL TAHRGLPTAR LFTDLNKVKK GQIFYVTNIK ETLAYKVVSI KVVDPTALSE
VKIVNGKDYI TLLTCTPYMI NSHRLLVKGE RIPYDSTEAE KHKEQTVQDY RLSLVLKILL
VLLIGLFIVI MMRRWMQHRQ
|
|---|
| |