Gene SAG0616 details

Gene Information

• Locus tag: SAG0616
• Symbol: vncR
• ID: 1013420
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus agalactiae 2603V/R
• Kingdom: Bacteria
• Replicon accession: NC_004116
• Strand: +
• Start bp: 606065
• End bp: 606718
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 637315814
• Product: DNA-binding response regulator VncR
• Protein accession: NP_687641
• Protein GI: 22536790
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATAT TAACTGTTGA AGATGATAAG TTGATAAGAG AGGGAATAAG TGAATACCTT 
TCAGAATTTG GATATACTGT TATTCAGGCT AAAGATGGAA GGGAAGCCTT GTCAAAATTT 
AATAGTGATA TAAACTTGGT TATCTTAGAC ATTCAGATAC CTTTTATAAA TGGTTTAGAA 
GTGTTGAAAG AAATTAGAAA GAAAAGCAAT TTACCAATTC TAATTTTGAC TGCATTTAGT 
GATGAAGAAT ATAAAATTGA TGCATTTACT AATTTAGTAG ATGGATATGT AGAAAAACCA 
TTTTCATTGC CTGTTTTAAA GGCTAGAATA GATTCTTTAA TTAAGAAGAA TTTTGGACAT 
TTAGAGAAGT TTGAATATAA GAATCTTTCG GTAAATTTTA ATAGTTATAC AGCTAAAATA 
AATGATGAAA AAATAGATGT AAATGCAAAA GAACTCGAAA TACTAAAATG TTTATTGGAT 
AATGATGGAC AAGTTTTAAC AAGAATGCAA ATTATTGATT ATGTCTGGAA GGATAGCGAA 
GAGATCCCTT ATGATCGAGT AGTAGATGTA TATATAAAAG AACTTAGAAA AAAATTACAA 
TTAGACTGTA TAACTACTAT AAGAAATGTA GGATATAAAT TGGAGAGAAA ATGA 

 

Protein sequence

MKILTVEDDK LIREGISEYL SEFGYTVIQA KDGREALSKF NSDINLVILD IQIPFINGLE 
VLKEIRKKSN LPILILTAFS DEEYKIDAFT NLVDGYVEKP FSLPVLKARI DSLIKKNFGH 
LEKFEYKNLS VNFNSYTAKI NDEKIDVNAK ELEILKCLLD NDGQVLTRMQ IIDYVWKDSE 
EIPYDRVVDV YIKELRKKLQ LDCITTIRNV GYKLERK